Roseimaritima multifibrata: FF011L_53880
Help
Entry
FF011L_53880 CDS
T07409
Name
(GenBank) Cadherin domain protein
Organism
rml
Roseimaritima multifibrata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
SdrD_B
Dockerin_1
Cadherin_4
CarboxypepD_reg
He_PIG
Planc_extracel
NOMO1-like_9th
Ric8
Motif
Other DBs
NCBI-ProteinID:
QDS96576
UniProt:
A0A517MNW2
LinkDB
All DBs
Position
complement(6989497..6994668)
Genome browser
AA seq
1723 aa
AA seq
DB search
MSRSSIRAGRLSAHRSSARRRHLFETLESRRLLASVSGQLWADDIPNGVIDSGEGFFANQ
TVYVDLNNSGSRQNGEPVNLTDAYGRYAFNNLDAGTYAIRQDSGFKQSYPAGFFGLDAKE
DGTVQLFEVNSEGDLFRTAIPRIVDAQNPLLTGLVRANDGQLLGTDGTGDGLYQIDSSTG
AFDKVGDIGFDIVDGLAYDSATENLYSVGKDSVDPDRHYLIQIDQATGVGTAIGVGVDDL
GDVADLTFEPGTQQIVGYSNSAGQFFRFGLDGTGSLLAPAAEPVQTGSLTFDGTDLVMAS
DGDASGQQWLKVNPITGAVEPGLVVSESVHPTSLFYAASGPVAQRVTLGQNEDRKEVDFG
LDLGPVGVSVIATDGSTDLRRSSREDSFSVVLDRMPLGNVVIDVSSSLAGVAADRNRLAF
NAENWQTPQEVKVRLRDDSLSTQTAQVQLAVNGDFSGLAWRNLTPVDVPVNIVYETFDAS
EIYISEVFLQSSFDTVGTAEQYLELRGEPDSLVPDGTYFVAVDGNSYWAGSIETVIDLSG
LRFGSNGFLVLLPDVTAVIPNVEATVLQSTAEGFSGLPDNRFETTESRNAIHYFSIDAQT
YMVVHSDSKPELNEDIDTGNRGVIDGVGADWSIHDSVARVWGSTVSLADRVYSPVVFVDN
GGSPAFNFTAPPNAVQILGDRIEYMARIGGSVGGTAEDWVGGSVGYENYIGAGWELDDYT
YSPITTPAFTRRQLDHVGDYNFIGGVYGEVYADTDRNGERDSGETPLEGVVVLADTNGNG
IRDVVTERISASNYVPGIPLDSVSSVATFRVLSSSGNSINRTLTVDTDFQFNRFQNVFST
VSDLGSMTPVFSGYRIRADFFRPVNSASVTFIGGDRNRTAVGWLEAYDANGQLLQIASTA
NLALGAQQTISVATFNDDIAYFETYYDGFTYDAYITDLQYEQREAIAVTDADGKYRLPML
ATDDYQISAGQAGFEIGGAAREAQIERFENFEFNFGMYDNSTPEMGAFRFLLDEHERAGS
VIGSVFAIDPDLEQTLQYRIAGGSGADAVAIDSSTGRLTVRRPQDLDFEQSPTVVLAVEA
VDPLGEIASGTVTIDLKDINDQPTIVNRALSVSEKANEGSVIGRIEFFDVDSGLAGEASL
SLLNDDGTFSIDSQTGMVRLIDNSSLDFETRPRLTLLVEVVDQGNPATKRLAEIPVVVRD
SNESPSILTESLIVSEAVPARGAVGKVAISDVDAGQNHFFRIVGGTGQNAFVIDRLSGMI
SLGSEPLDYETSPTYTVDVLVSDSGSPSLSDSRTIQIDVTNINEPPVLPPLNLDVVENVA
AGSVVAELAAIDPESGQEVRYKILGGSAQYDFDVDPVTGLLTVASGADLDFEKYPNKVLT
VEVSDNGSPPASLVRDIPVQLQNAPEYPLIESNQFQLLETLKPGAFVGLVQASDPDDGDS
IAFEISGGTAASLLEIDSVSGALTVADAASFNFEELQEYSLEVTVSDSSGLAAVRTLLIQ
IVDGNEAPVFRGDLLDAVVLNDSVRVKHGYPLSLTFEPGIAVDPDAGQTPVLTMIGADGP
LADWLSFDPVTGILSGVAEARHIGFHAVALQASDQGNPKASAVHVFTIEVLPNEFAFQNG
RDRFDVDNNQIVVASDALAVINYLNRFGSRSLQATDDFYGFVDVNGDNFVSPTDALDIIN
RLGQLSRQGGMGEAAVPQDIDVGRTGDLEDEAVLLYLDEVSSL
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctcttctattcgtgctggacgtttgtccgcccaccgatcttctgcccgtcgt
cgtcacctgtttgaaacgcttgaatctcgccggttactggcatcggttagtgggcagtta
tgggcagacgatattcccaatggtgtgatcgattcaggggaaggatttttcgctaatcag
accgtctatgttgacctgaataacagcgggagccgtcagaatggcgagcccgtcaatctg
accgacgcctatgggcgttatgccttcaataacctggacgcgggaacctacgcgatccgt
caagattcaggattcaaacaatcgtatccggccggattcttcggcctagatgcaaaggag
gatgggacggtccagttgttcgaagtcaattctgagggcgatctgttccgaactgcgata
ccacggatcgttgatgcacagaatccgcttttgacagggcttgtccgagccaacgacggc
caattgctgggaaccgacggtacgggagacgggctttatcaaatcgattcgtcgaccgga
gcgtttgataaggtcggcgacatcggattcgatattgtagatgggttggcgtacgattcg
gcgactgaaaatctctattccgttggcaaggattccgtcgacccggatcgacattacttg
atccagatcgatcaagcgacaggagtcggtaccgcgatcggagttggggtggacgatctg
ggggatgtcgccgatctaacgttcgaaccggggacgcaacagattgttggctatagcaat
agcgctggccaattctttcggtttggtttggatggcaccggaagtctgctggctcccgcg
gcagagcccgtgcagacgggctctttgacgtttgacggtacggatctggtgatggcgtcg
gatggggatgcaagcggtcagcagtggttgaaagtcaatccgatcacgggcgccgtggag
ccggggctggtggtgagtgaatcggtccatcccacaagtttgttttatgcagcaagcgga
ccggttgcgcagcgtgtcacgttggggcagaacgaagatcgcaaagaggtcgattttggt
ttggacttagggccggttggagtgtcggtgatcgcaaccgatggttcgaccgatcttcga
cgtagttcccgcgaggattcgtttagcgtggttcttgatcggatgccacttgggaatgtg
gtgatcgatgtgtcaagttcgttggcgggtgtggcggcggatcgaaatcgattggcgttc
aatgctgagaactggcagacgccacaggaagtcaaagttcgtttgagggacgattcgttg
tcgactcaaacggcgcaggtgcagcttgctgtgaatggtgatttttcggggttggcttgg
cggaatttgaccccggtcgatgttcctgtaaatattgtgtatgagacgtttgacgcgtct
gagatctacatcagtgaggtctttcttcagtctagttttgatacggtggggaccgcggag
caatatttggagctgcgtggggagcccgattccttggtgccggacgggacctattttgtg
gccgtcgatggaaacagttactgggctggcagtattgaaaccgtgatcgatttgtcaggg
cttcggtttggtagcaatggattcttggttttgttgcccgatgtaactgcggtgatccct
aatgttgaagcaaccgttctgcaaagtacggcggaaggattctcaggtctccctgacaat
cgttttgaaaccacggaatcccgcaacgcgattcactatttttcgattgatgcgcaaacc
tacatggtggtgcattctgattccaaaccagagctgaatgaagatattgatacgggtaac
cggggcgttattgatggcgtgggggccgactggtccattcacgattcagtcgccagggtt
tggggcagcacggtttccctggcggatcgtgtttacagtcccgtcgtgtttgtcgacaac
ggcggttcacctgcttttaatttcactgcaccgccaaacgcggttcagattctgggcgac
cggattgaatacatggcgcggatcggtggttctgtcggagggactgcggaagactgggtg
ggaggttccgttggctacgaaaattacatcggcgccggttgggagcttgatgattacacc
tattcgccgattacgactcctgcttttacacgccgtcagctagaccacgtgggagactac
aattttattggcggagtctatggtgaggtctacgcggacacggatcgcaacggggaaaga
gattcaggagaaacgccactcgaaggggtggtggtgcttgcggacacgaatggaaatggg
atccgtgacgtcgtgacggagaggatttcggcgagtaactatgtgcccggtatcccgctc
gatagtgttagttcggttgccacgttccgagtgctttcctcctccggtaattcgatcaac
cgaacgctgacggttgacacggactttcaatttaatcgtttccaaaacgtcttctcaacg
gtttcggatttaggttcgatgactcccgtcttttccggttaccggattcgagcggatttc
tttcggcccgtgaattccgcttcggtgaccttcatcggcggagatcggaaccgcaccgcc
gtgggctggctggaggcttatgatgcaaatggccagctgttgcaaatcgcatccacggcc
aacttggctttgggcgctcagcaaacgatttcggtggcgacgtttaacgacgacatcgct
tattttgaaacctattacgatggttttacctacgacgcctatatcacggatttacaatac
gagcagcgtgaagcgattgcggtgaccgacgccgatggtaagtatcgcttgccaatgttg
gcgaccgatgattatcaaatcagtgcgggacaggccgggttcgagatcggtggggccgca
cgtgaggctcagattgaacgtttcgagaatttcgaattcaacttcggaatgtacgataat
tcgacaccggaaatgggagcctttcgcttcttgctagatgaacatgaacgggcgggaagc
gtgattggatcggtctttgcaatcgatcccgatctggagcaaactttgcagtatcggatc
gctggaggctccggggccgacgcggtggcgatcgattccagtaccggccggttgacggtt
cggcgaccgcaagacctcgatttcgagcagagcccaacggtcgttcttgctgttgaagcg
gtggatccactgggggagattgccagcggtacggtcacgattgatttgaaggatatcaat
gatcagcccacaatcgtcaaccgagcgttaagcgttagcgagaaagcaaacgaaggatcc
gtgatcgggcgaattgagttttttgacgtcgattcaggccttgctggcgaagctagcctg
agcctcttaaatgatgatgggacgttttcgatcgattcccaaaccgggatggtcaggttg
atcgataattccagcttggactttgaaacgcggccacgtttgaccttgttggtcgaggtg
gttgatcaagggaatcccgcaaccaaacggctggccgaaatccccgtggtcgtacgagat
tccaatgagtcgcctagtattctgaccgaatcgctgatcgttagcgaagcggttcccgct
agaggggccgttggcaaggttgccatttcggatgtcgatgcaggccagaatcacttcttc
cggatcgtgggggggacaggccagaatgcgtttgtgatcgatcgtctatccggaatgatt
tcgctgggatctgaaccactcgattatgaaacgtcacctacttatacggtggatgtgctg
gtcagcgattccggttccccgtccctaagtgattctcgaacgattcaaatcgatgtaacg
aacatcaatgagcctccggttttgccaccgcttaaccttgatgttgttgaaaacgtcgca
gctggatcggtggttgccgaattggctgcgatcgaccccgaatcgggccaggaggtgcgg
tacaaaatcctgggcggatcggctcagtacgatttcgatgtcgatccggtgactggactg
ctgaccgtggccagcggagcggatcttgattttgaaaagtatccaaacaaggttttgacg
gttgaggtttccgataacggatcaccgccagccagtttggttcgagacatccccgttcag
ttacagaacgcccccgaataccctctgatcgaatcgaatcagttccaactgctcgaaacc
ttaaagccaggagcctttgtcggtttggttcaggcttcagatccggatgacggggactcg
attgcgtttgaaatttccggcggaacggctgcgtcgctgctggagatcgattcggtttcc
ggagccctaacggtcgcagatgctgcatcgtttaattttgaagagctgcaagaatatagt
cttgaggtgacggtcagcgattcaagcggtctggctgccgtgcgaactttgctgattcaa
atcgtcgatggcaacgaagctccagtcttcaggggtgatttgctggacgctgttgtgctg
aacgacagcgtcagagttaagcatggttatcctttaagtttgaccttcgaacccgggatt
gctgttgatcctgatgcaggacagacaccggtcctgaccatgattggtgccgatggtccc
ttggccgattggttgtcgtttgacccggtaaccggcatcctgtcaggcgtcgcagaggcg
cggcatatcggtttccacgcggttgctttgcaggccagcgatcaagggaatcctaaagcg
agtgccgtgcatgtgtttaccattgaagtgttgccaaatgagttcgctttccagaatgga
cgcgaccgtttcgatgtggacaacaatcagattgtcgttgcttcggatgccttggcggtg
atcaattacctgaatcgttttggcagtcgaagcctgcaggcgaccgatgatttttacggc
tttgtagacgtgaacggcgataactttgtttcgccaacggatgccttggacattattaat
aggctggggcagctctcacggcagggtgggatgggggaagcggccgttcctcaggatatt
gacgttggacgcaccggcgatcttgaagacgaagccgtcctgctttaccttgatgaagtg
tctagtttgtag
DBGET
integrated database retrieval system
