Roseovarius mucosus: ROSMUCSMR3_00046
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Entry
ROSMUCSMR3_00046 CDS
T04779
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rmm
Roseovarius mucosus
Brite
KEGG Orthology (KO) [BR:
rmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rmm03016
]
ROSMUCSMR3_00046 (rnd)
Enzymes [BR:
rmm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ROSMUCSMR3_00046 (rnd)
Transfer RNA biogenesis [BR:
rmm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ROSMUCSMR3_00046 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ARE81559
UniProt:
A0A1V0RIE0
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All DBs
Position
46374..47534
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AA seq
386 aa
AA seq
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MKTITTTDDLAAFCAMARKHPYVTLDTEFLRERTYYSKLCLLQMAVPGADDDTAVLVDPI
AGAEMSMEPLYELFRDTSVVKVFHAARQDLEIFHVDAGVIPDPLFDTQVAAMVCGFGEQV
GYETLVKRIAKQTVDKSSRFTDWSRRPLTEAQKVYALADVTHLRVIYEYLAKKLASSGRD
KWVAEELSVLTDPATYRTDPADAWQRVKTRNTSPKFLAILRELARFREEYAQSHDVPRSR
VYKDDALVELASTKPVTHQDLGRSRLLLREARKGDIADGILAAVKAGLECPAERMPRAEA
LEDRAQVNPALADLLRVLLKAKSESYGVAAKLIASASDLDAIAAGMRDLPALRGWRLDVF
GADALRLCKGEVALAVKGSGVETVDL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccatcaccacgactgacgatctggcggccttttgcgccatggcgcgcaagcac
ccctatgtgacgctcgataccgagtttctgcgtgagcgcacgtattattccaagctctgc
ctcttgcaaatggctgtgccgggtgcggatgacgacactgccgttctggttgatccgatt
gccggtgccgagatgtcgatggagccgctttacgagctgtttcgcgacacatcggtggtc
aaggtgttccatgccgcgcggcaggatctggaaattttccacgttgatgccggggtgatt
cctgatccgttgtttgacacgcaggtggcggccatggtgtgcgggtttggcgagcaagtg
ggctatgaaacgctggtcaagcggattgccaagcagacggtcgacaaaagctctcggttc
accgattggtcgcgccgaccgctgaccgaggcgcaaaaggtctatgctctggcggatgta
acgcatctgcgggtcatttacgaataccttgcgaagaagctggcaagttccgggcgcgac
aaatgggtggccgaagagctgagcgtgctgacggatcccgccacctatcgcaccgaccct
gccgatgcctggcagcgggtcaagacgcgcaacacctcgcccaagtttctggccattctg
cgcgaattggcgcggtttcgtgaggaatatgcgcaatcgcatgacgtgccgcgcagccgg
gtctacaaggatgatgcgttggtcgaactggcgtcaaccaagcctgtgacgcatcaggat
ttggggcggtcgcggcttttgctgcgcgaggcgcgcaagggcgacattgccgatggaatt
cttgcagcggtcaaggcggggctggaatgcccggcagagcggatgccgcgcgccgaggcc
ttggaagatcgcgcgcaggtcaacccggcgctggcggacctgttgcgggtgctgctcaag
gccaagagcgagagttatggcgtggcggccaagctgattgccagtgccagtgaccttgac
gccattgcggcggggatgcgcgatctgcccgcgctgcgtggctggcggctggatgtgttt
ggtgccgacgccctgcgcctgtgcaagggcgaggtggccttggcggtcaagggcagtggc
gtagagactgtggatctctga
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