Roseovarius mucosus: ROSMUCSMR3_00131
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Entry
ROSMUCSMR3_00131 CDS
T04779
Symbol
cdhR
Name
(GenBank) HTH-type transcriptional regulator CdhR
KO
K21826
AraC family transcriptional regulator, glycine betaine-responsive activator
Organism
rmm
Roseovarius mucosus
Brite
KEGG Orthology (KO) [BR:
rmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmm03000
]
ROSMUCSMR3_00131 (cdhR)
Transcription factors [BR:
rmm03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ROSMUCSMR3_00131 (cdhR)
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GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
Motif
Other DBs
NCBI-ProteinID:
ARE81642
UniProt:
A0A1V0RJ77
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Position
complement(139438..140460)
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AA seq
340 aa
AA seq
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MPGNRVMMTSEATKIAVKAPKEPKRFVFVLLDRFTLLSFASAIECLRIANRMAEEELYSW
VLTGDSEDVITCSAGVRFNLDFALSDLNREDVVLVCGGMDVQKAATKRMLNWLRREARKG
LRMGGLCTASYVLARAGLLDGKRATIHWENHDSFLEEFEDVTLTKSVFVIDGNRMSTAGG
TSSIDLMLNIIADDHGEKLANAVADQQIYSSIRTDQDTQRLSVPTRIGVRHPKLSQVIQM
METNIEEPISPATLARDVGMSTRQLERLFRRYLSRSPKRYYMELRLQKARNLLMQTDMTV
INVALACGFASPSHFSKCYRAHYNTTPYRERGAHSSRLSV
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgccggggaatcgagtgatgatgacgtcagaggccacgaagatcgcggtgaaagcgccg
aaggagcccaaacgctttgtgtttgtgttgctggacagattcaccctgctcagctttgcc
tcggccatcgaatgtctgcgcatcgccaatcgtatggcagaagaagagctgtatagctgg
gttttgacaggtgattccgaggatgtgatcacctgctcagccggggtgcggttcaatctc
gactttgccctatccgatttgaaccgcgaggatgtggttctggtttgcggcggcatggat
gtgcaaaaggccgccaccaagcgcatgttgaactggctgcgccgtgaggcgcgcaagggg
ctgcgcatgggggggctgtgcaccgcgtcctatgttctggcgcgcgcagggcttttggat
ggcaagcgcgcgacgatccattgggaaaaccatgacagttttctcgaagaattcgaggat
gtcaccctgacgaaatcggtcttcgtgattgatggcaaccggatgagcacggcgggcggc
acgtcgtcgattgatctcatgctcaatatcatcgcggatgatcatggcgaaaagctggcc
aatgccgtggcggatcagcagatctatagctcgatccgcaccgatcaggacacgcagcgt
ctgagcgttccgacacgcatcggcgttcggcatcccaagctgagccaagtcattcagatg
atggaaaccaatatcgaagagccgatcagccctgcgacattggcacgcgatgtgggcatg
tcgacccggcagttggaacgtctgtttcgccggtatctcagccgcagccccaagcggtat
tacatggaactgcgcctgcaaaaggcgcgcaacctgttgatgcagaccgatatgaccgtg
atcaacgtggcgctggcctgcggatttgcctcgccctcgcatttctcaaagtgctaccgg
gcgcattacaacacgacgccctaccgcgaacgcggcgcacatagctcgcgcctgtcagtt
tga
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