Roseovarius mucosus: ROSMUCSMR3_00144
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Entry
ROSMUCSMR3_00144 CDS
T04779
Symbol
gcvA
Name
(GenBank) glycine cleavage system transcriptional activator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
rmm
Roseovarius mucosus
Brite
KEGG Orthology (KO) [BR:
rmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmm03000
]
ROSMUCSMR3_00144 (gcvA)
Transcription factors [BR:
rmm03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ROSMUCSMR3_00144 (gcvA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
HTH_20
MarR_2
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ARE81655
UniProt:
A0A1V0RJ28
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Position
complement(152453..153364)
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AA seq
303 aa
AA seq
DB search
MTLPRRFLPSIASLRALEALDRLGSATAAAAELSQTQSAVSRQLKTLEDQLGVGLVVRQG
RGIYLTPEAADYADKIRGALQQIAQASLKLTTDPAGGSLSLAILPTFGMRWLVPRLAEFA
RLYPEVTINLSTRLKPFNFVTEPFDAAIHFGKHDWLGTEALRLRTERVVAVATPEFLAAH
APIERAADLMRLPLLQIETRPGAWPAWFEAQGVTGAKVSGTIYDQFSTITQAALHGLGVA
LLPDYLAEQDLATGRFRSAWGDKTLISGAYYLVWPVQNARDPALCKFRDWLAGQAEDEDL
LPR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgccccgccgctttcttccgtcgattgcctcgttgcgtgcgctagaggcgctg
gaccgtttgggcagcgccacagcggcggcggcggaactgtcgcaaacgcaaagtgcggtc
agcaggcaattgaaaacattggaggatcaacttggcgtggggttggtcgtgcggcaaggg
cgtggtatttacctgacgccggaagctgccgattatgccgataaaatccggggcgcgctg
caacagattgcgcaagcgtcgctcaagctaacgacggatccggcgggcgggagtctgagc
cttgcgattctgccgacattcgggatgcgctggctggtgccgcgattggccgagtttgcg
cggctttatcccgaagtgacgatcaacctgtcaacacggctgaagccgtttaactttgtc
acggaaccctttgatgcagccatacattttggcaagcacgattggttgggcaccgaagcg
ctccggctgcggaccgagcgtgtggtggcggtggcaacgccagaattcttggcagcgcat
gcgccaatcgaacgcgcggcagacctgatgcgcctgccgctcttgcagattgagacgcgc
cccggtgcctggcctgcgtggttcgaagcgcagggcgtgaccggggccaaggtgagcggc
accatctatgaccaattttcaaccatcacgcaggcggcgttgcatggtttgggggtcgct
cttttgccggattatctggcagagcaggatctggcgacgggccgatttagatcagcttgg
ggggacaagacgctgatttccggggcttactatcttgtttggcccgtccagaatgcgcgc
gatccggcgctctgcaagttccgcgattggctggcgggacaggccgaggatgaagacctg
ctgccgcgctga
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