Roseovarius mucosus: ROSMUCSMR3_00693
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Entry
ROSMUCSMR3_00693 CDS
T04779
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rmm
Roseovarius mucosus
Brite
KEGG Orthology (KO) [BR:
rmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmm03032
]
ROSMUCSMR3_00693 (ihfB)
03036 Chromosome and associated proteins [BR:
rmm03036
]
ROSMUCSMR3_00693 (ihfB)
03400 DNA repair and recombination proteins [BR:
rmm03400
]
ROSMUCSMR3_00693 (ihfB)
DNA replication proteins [BR:
rmm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ROSMUCSMR3_00693 (ihfB)
Chromosome and associated proteins [BR:
rmm03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ROSMUCSMR3_00693 (ihfB)
DNA repair and recombination proteins [BR:
rmm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ROSMUCSMR3_00693 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
ARE82194
UniProt:
A0A1V0RKB7
LinkDB
All DBs
Position
complement(710364..710645)
Genome browser
AA seq
93 aa
AA seq
DB search
MIRSELIQKIADENPHLYQRDVERIVNTIFNEITDALAEGNRVELRGFGAFSVKKRDART
GRNPRTGESVHVEEKNVPFFKTGKLLRDRLNGK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatccgatcggaactgattcaaaaaatcgctgacgagaacccgcatctttatcagcgc
gacgtcgagcgtatcgtcaacaccatcttcaacgagatcaccgatgcgctggccgagggc
aaccgcgtcgagttgcgcggctttggtgcgttctcggtgaaaaagcgggatgcgcgcaca
ggtcgcaatccacgcaccggtgaaagcgtgcatgttgaagagaaaaacgtgcccttcttc
aagaccggcaagctcttgcgtgaccggctcaacggaaagtaa
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