Roseovarius mucosus: ROSMUCSMR3_00821
Help
Entry
ROSMUCSMR3_00821 CDS
T04779
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rmm
Roseovarius mucosus
Pathway
rmm03420
Nucleotide excision repair
rmm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ROSMUCSMR3_00821 (uvrD)
03430 Mismatch repair
ROSMUCSMR3_00821 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmm03400
]
ROSMUCSMR3_00821 (uvrD)
Enzymes [BR:
rmm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ROSMUCSMR3_00821 (uvrD)
DNA repair and recombination proteins [BR:
rmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ROSMUCSMR3_00821 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ROSMUCSMR3_00821 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ARE82320
UniProt:
A0A1V0RKM8
LinkDB
All DBs
Position
complement(841845..844184)
Genome browser
AA seq
779 aa
AA seq
DB search
MNRFDESDAFEGASLSARAMAARPAPYLDDLNPEQRRAAETLDGPVLMLAGAGTGKTKAL
TTRIVHLMNTGRAGPGDILAVTFTNKAAREMKERVGRLLGQPAEGMPWLGTFHSICVKLL
RRHAELVDLKSNFTILDADDQLRLLKQLVQASGIDDKRWPARMLAGIIDQWKNRAWTPDN
LPASEGSAYDGKGPALYHQYQARLKELNAVDFGDLLLHVVTIFQRHDDVLRQYQRWFRYI
LVDEYQDTNVAQYLWLRLLAGGHKNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAAVI
RLEQNYRSTPHILAAASGVIAGNRDRLGKELWTEAQEGEKLRLIGHWDGEEEARWIGEEI
DAMQRGTRGMRPYSLDAMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERLEIRDAM
AYFRLVVSPADDLAFERIVNTPKRGLGDKAQQKIQMTARQHGVPLVEGARLLLDDKGITG
KAAGELRLLIDGLGRWGRMVGDADISHVELAEMILDESGYTGMWQNDKTPEAPGRLENLK
ELVKALEGFENLQGFLEHVSLIMDNEAGEEGEKVTLMTLHAAKGLEFPAVFLPGWEDGLF
PSQRSMDESGVRGLEEERRLAYVGITRAEEVCTISFAGNRRVYGQWQSQMPSRFIDELPE
AHVDVLTPPGLYGGGYGAAASSGIESRAAEANVYNSPGWRRLQARGAERPLSQPSEARHS
VIDLQAMSAHTVGERVFHQKFGYGAIIAIEGDKLEIAFEKAGTKKVVARFITGADDVPF
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaacagatttgacgaatccgacgcttttgagggggccagcctctcggcccgtgccatg
gcggcgcggcccgcgccctatcttgatgatctcaaccccgaacagcgccgcgcggcggaa
acgctggatggtccggtgctgatgctggctggcgcgggcacgggcaagaccaaggcgctg
accacgcgcatcgtgcatctgatgaacaccgggcgcgcggggcccggcgatatcttggcc
gtgacctttaccaacaaggccgcgcgcgagatgaaagagcgtgtgggccgccttttgggt
cagccggcagaggggatgccgtggctgggcacctttcattcgatctgcgtcaagcttttg
cgtcggcatgccgaactggttgatctgaaatcgaatttcaccattcttgatgccgacgat
caactgcgcctactcaaacaactggtgcaggcgtctggcatcgacgacaaacgctggccc
gcgcggatgctggcgggaatcatcgaccagtggaaaaaccgcgcttggacgcctgacaat
ctgcccgcgtcagagggcagcgcctatgatggcaagggtccggcgctctaccatcagtat
caagcgcgactgaaggaattgaatgcggtcgattttggcgatctgctgctgcatgttgtg
acaatattccagcgccacgatgacgtgctcaggcaataccaacgctggttccgctatatc
ctcgtggacgagtatcaggataccaacgtcgcgcaatatctctggctgcggcttttggcg
ggggggcacaagaacatctgctgcgtgggcgatgatgatcagtcgatctatggctggcgc
ggggccgaagtgggcaatatcctgcggttcgaaaaggattttcccggcgcggcggtgatc
cggcttgaacagaattaccgctcgacgccgcatattctcgctgccgcctctggtgtgatc
gcgggaaatcgcgaccggcttggcaaagagttgtggaccgaggctcaagagggagaaaag
ctccgcctgatcggccattgggatggcgaggaagaggcgcgctggattggcgaagaaatc
gacgcgatgcaacgcggcacgcggggcatgcggccctattcgcttgacgcaatggcaatc
ctcgtgcgggccagccaccagatgcgcgccttcgaggatcggtttctgaccatcggtctg
ccctaccgcgtgatcggcggcccgcgcttttacgagcgtttggaaattcgcgatgccatg
gcctatttccgccttgtggtctcgcctgcggatgatttggcctttgagcggatcgtcaac
acgcccaagcgcgggttgggtgacaaggcgcagcagaaaatccagatgaccgcgcgccag
catggtgtgccgttggtcgaaggcgcgcgccttttgcttgacgacaaggggatcaccggc
aaggcggcgggcgagctgcgccttttgatcgacgggcttggccgttggggccggatggta
ggcgatgccgatatcagccatgtcgaactggcggagatgatcctcgacgagagcggctat
actggcatgtggcaaaacgacaagacgcccgaggcaccggggcggcttgaaaacctcaag
gaactggtcaaggccctcgaagggttcgagaacctgcaagggtttttggaacacgtgagc
ctcatcatggataatgaggcgggtgaagagggcgagaaggtcacgctgatgacgttgcac
gcggccaaagggctcgagtttccggccgtgttcctgccgggatgggaggatgggcttttc
ccctcgcaacgctcgatggacgaaagcggcgtgcggggattggaagaggagcggcggctg
gcctatgtcggcatcacccgtgccgaagaggtctgtacgatttcattcgcgggcaatcgc
cgggtctatggccagtggcagagccagatgccatcacgcttcattgatgaattgcctgag
gcgcatgttgatgtgctgacccctccgggcctttatggcgggggctatggggcggcggcc
agttcaggcatcgagagccgcgccgccgaagccaatgtttacaatagccccggttggcga
cggcttcaggcgcggggcgcggagcggcccctgagccaacccagtgaagcgcgccacagc
gtgatcgacctgcaggcgatgagcgcgcacacagtgggcgagcgcgtctttcatcaaaag
tttggctatggcgcaatcatcgccatcgagggcgacaagctcgaaatcgcgttcgagaag
gcgggcaccaaaaaggttgttgcccgtttcatcacgggcgcggatgacgttccgttctag
DBGET
integrated database retrieval system
