Roseovarius mucosus: ROSMUCSMR3_00861
Help
Entry
ROSMUCSMR3_00861 CDS
T04779
Symbol
arfA
Name
(GenBank) peptidoglycan-binding protein ArfA
KO
K03286
OmpA-OmpF porin, OOP family
Organism
rmm
Roseovarius mucosus
Brite
KEGG Orthology (KO) [BR:
rmm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rmm02000
]
ROSMUCSMR3_00861 (arfA)
Transporters [BR:
rmm02000
]
Other transporters
Pores ion channels [TC:
1
]
ROSMUCSMR3_00861 (arfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
BON
DUF748
Motif
Other DBs
NCBI-ProteinID:
ARE82358
UniProt:
A0A1V0RKQ8
LinkDB
All DBs
Position
complement(875580..877487)
Genome browser
AA seq
635 aa
AA seq
DB search
MRLSSAFTIAGTFVGAAVLAVVAAGFAVSAIEDSSRRAVRDTLDRVGLVWADVDTDGLQL
FLAGTAPSEALRFKALSLAGTVVDAARVIDQMLVQDAADIAPPRFAIEILRNDSGISLIG
LVPAATDRDKLLADIASVTDDVPVADLLDSADYPYPETWPAALRYAVRSLGKLPRAKISV
SADRVEIKAMVDSTEAQRRIETDLARTAPDDVRLALAISAPRPVITPFTLRFVIDETGAR
FDSCSADTEEARDGILRAAGKAGIQTKADCVVGMGVPSPQWSRAAELAIAAVADLGGGTV
TFSDADVALLAPEGTAQSLFDDVAGKLEADLPEVFALTATLPPPPDAAQPAAPEFVATLS
PEGQVLIRGRVGSETSRETVRSFAKARFSSDSVHLTARVAEGLPRDWPIRVLTGLEALSY
LSNGVVTVTPDNIGVKGNTGRKTASAEIAQFLAEKLGEAEQYSIDVTYKEALDPVAGLPT
PEECEAQIAGIQAERKINFEPGSAKIDAQGAAIMDDIADVLKKCGEVRMEIGGHTDSQGG
EDMNAQLSLSRARAVLDELRMRRVLTSSIDAKGYGESVPIADNETEEGRETNRRIEFRLI
RPEPLPDEQTALESLEEPGEEGAEAEETTQDTPTE
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttatcatctgcctttacgatcgccggaacctttgtcggggcagcggtgcttgcg
gttgttgccgcaggctttgctgtgagcgccatcgaagacagctctcggcgggcggtgcgt
gacacgctggaccgggttggattggtctgggccgatgtcgatacggacgggctgcaactc
tttctggcgggcaccgcgccctctgaggcgttgcggttcaaggcgctgtcgctggcgggc
acggtggttgatgcagcgcgggtgatcgaccagatgttggtgcaagatgcagccgatatc
gcgccgccgcgctttgccatcgaaatcctgcgcaacgatagcggcatttccttgatcggg
ctggtgcctgcggccacggaccgagataagcttttggcggatatcgcgtctgtgaccgat
gacgtcccggtggccgacctgcttgattccgcagattacccgtatccagagacatggccc
gcagcgctgcgttatgcggtgcggtcgctgggaaaattgccgcgcgccaagatttccgtg
agtgcggatagggtcgagatcaaggccatggtcgacagcacagaggcacagcgccggatc
gagacggatctggcgcgcacggccccggacgatgtgcgcctggcgctcgcaatctcggca
ccgcggccagtgatcacgccgtttaccctgcggttcgtcatcgacgaaacaggcgcgcga
ttcgactcctgctctgcggataccgaagaggcgcgcgatggtattttgcgcgctgcgggc
aaggctggcatccagaccaaggccgactgtgtggtcgggatgggtgtgccctcgccccaa
tggtcgcgggcggcagaactggccatcgcggcggtcgcggaccttggcggcggcacggtt
acgttttcggatgccgatgtagcgcttttggcgcccgaaggcacggcgcaaagcctcttt
gacgacgtggcgggtaaacttgaagccgatctgcccgaggtttttgcccttactgccacg
ttgccgccgccgcccgatgccgcgcagcccgcagcgccagagtttgtggccactctgtcg
cccgaaggtcaggttctgattcggggccgggtgggcagcgagaccagccgcgagacggtg
cgtagctttgccaaggcgcggttttcatcggattcggtgcatttgacggcgcgggtcgcc
gagggtttgccgcgtgattggccgatccgcgttctgaccgggcttgaagccttgtcctat
ctgtcgaacggtgtcgtgaccgtcacgcccgataatatcggcgttaagggaaatacgggc
cgcaagactgccagtgcggaaatcgcgcagtttcttgcggaaaagctgggcgaggcagaa
caatactctatcgacgtgacgtataaagaggccctcgatcctgtggccgggcttccgacg
ccagaggaatgcgaggcgcaaatcgcggggatccaagcagagcgcaaaatcaactttgag
ccgggatcggccaagattgacgcccaaggggcggccatcatggatgacattgccgatgtg
ctgaaaaaatgcggcgaggttcggatggaaatcggcggccataccgatagccagggtggc
gaggatatgaacgcgcaactcagcctctcgcgtgcgcgcgcggttctggacgaattgcgc
atgcgccgcgtgctgacatcgagcattgacgccaagggctatggtgagagcgtgcccatc
gctgataacgagaccgaagagggccgcgagaccaaccgccgtattgaatttcgcctgatc
cgccccgagccactgccagatgagcaaacagcgcttgaaagccttgaagaaccgggggaa
gaaggtgcagaggcagaagagaccacgcaggatacgccaaccgaatga
DBGET
integrated database retrieval system
