Roseovarius mucosus: ROSMUCSMR3_00957
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Entry
ROSMUCSMR3_00957 CDS
T04779
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rmm
Roseovarius mucosus
Pathway
rmm03410
Base excision repair
rmm03430
Mismatch repair
rmm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ROSMUCSMR3_00957 (recJ)
03430 Mismatch repair
ROSMUCSMR3_00957 (recJ)
03440 Homologous recombination
ROSMUCSMR3_00957 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmm03400
]
ROSMUCSMR3_00957 (recJ)
DNA repair and recombination proteins [BR:
rmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ROSMUCSMR3_00957 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ROSMUCSMR3_00957 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ROSMUCSMR3_00957 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
GapR_DNA-bd
Flg_hook
SOGA1-2-like_CC
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
ARE82454
UniProt:
A0A1V0RL18
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All DBs
Position
981901..983649
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AA seq
582 aa
AA seq
DB search
MQSAFLGVESSLTSRRWVGPGVEADRLAEAMAQATALPRPLCQTLARLGVPEDAAEAYLA
PTLRDLLPDPHALRDMERAAARFLKALRGGERIAIFADYDVDGGTSAALLIDWLRQMRAP
SPTLYIPDRIDEGYGPNVPAMSDLAARHDLIVCVDCGTLSHEAIAAATGADVVVLDHHLG
GETLPPAHAVVNPNRQDESGDLAHLCAASVVFLMLVEAGRQLRDSGAQGPDLMAMLDLVA
LATVADVAPLIGVNRAFVRQGLRVMAARARPGLVALADVARMDTAPNAYHLGFLLGPRVN
AGGRIGKADLGARLLACDNPAEARAMAERLDQLNTERREVEAQVRDAALAQAEARGLDAP
LVWAAGEGWHPGVVGIVASRLKERANRPAIVIGLDGDEGKGSGRSVSGVDLGAAIQRLAS
EGLLIKGGGHKMAAGLTVARERLEAAMARLSELLAKQGAGVGGAADLRLDGLLMPGAATV
ELVEQIEAAGPFGAGAPGPRYVFPDCQITFAKALSGAHLKLRFGDGMGASLDAIAFGALD
GPLGPALLNHGGARFHLAGRLDLNSWGGRQTVQLRLEDAAPA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcggcctttctcggagttgagagctcgttgacaagtcgccgatgggtcggtccg
ggcgtcgaggccgaccgactggccgaggccatggcacaggccaccgccctgccccgcccc
ctgtgtcagacattggcgcgccttggcgtgccagaggacgcagccgaggcctatctcgcc
ccgaccctgcgggatcttctgcctgacccgcacgcgttgcgcgacatggaacgggccgcc
gcgcggtttctcaaggcgctgcgtggcggggaacgcatcgccatcttcgccgattacgat
gtcgatggtggcacctctgctgcgctgctgatcgactggctgcgccagatgcgcgcgccc
agccccacgctctatatccccgaccggatagacgagggatatgggccaaacgtgcccgcc
atgtccgatctagccgcgcgccacgatcttattgtctgcgtcgattgcggcaccctcagc
catgaggcgattgccgcagcgacaggcgcggatgtggtggtgctcgatcaccacttgggc
ggagaaaccctgccgcccgcccatgccgtggtcaatcccaaccgtcaggacgagagcggt
gatctggcgcatctttgcgccgccagtgtcgtgttcctgatgctggtcgaggccgggcgg
caattgcgcgacagcggcgctcaggggccagacctgatggcgatgctcgatctggtggcg
ctggccaccgtggccgatgtagcgcctctgattggcgtcaaccgcgcctttgtgcgccaa
gggctgcgcgttatggctgcgcgcgcgcgtcccggtttggtggcgctggcagatgtggcg
cggatggacaccgcccccaacgcctatcacctaggctttctgctcgggccgcgcgtcaac
gcaggcgggcggatcggcaaggcggacttgggcgcgcgccttctggcctgtgacaatccc
gccgaggcacgcgccatggccgaacgtcttgaccagctcaacaccgaacgccgcgaggtc
gaggcgcaggtgcgcgatgccgcccttgcccaagccgaggcgcgaggcctggacgcgccc
cttgtctgggccgcaggcgagggttggcatcccggtgtcgtgggcatcgtcgccagccgc
ctcaaggaacgcgccaaccgccccgccatcgtgatcgggttggacggcgacgagggcaaa
ggctcgggtcgctcggtctcgggcgttgatctgggggccgccattcagcggctggccagc
gagggcctcttgatcaaaggcggcgggcacaagatggcggcgggtctcaccgtcgcgcgt
gagcggctagaggccgccatggcgcgtctttcagagttgcttgccaaacagggcgcaggc
gtgggcggtgccgccgatctgcggcttgacggtcttttgatgcccggtgccgcaacggtc
gagcttgtcgaacagatcgaggccgcaggcccctttggcgcaggcgcgcccggcccccgt
tatgtctttcccgactgccagatcacctttgccaaggcgctgagcggcgcacatctcaag
ttgcgcttcggggatggcatgggggcaagccttgacgccatcgcatttggggcgcttgac
ggcccgttggggcctgcgctcttgaaccatggcggcgcgcgattccacctcgccgggcgg
cttgatctcaacagttggggcggtcggcaaaccgtgcaactgcgcctggaggacgccgcc
ccagcctga
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