Roseovarius mucosus: ROSMUCSMR3_01063
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Entry
ROSMUCSMR3_01063 CDS
T04779
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rmm
Roseovarius mucosus
Pathway
rmm00470
D-Amino acid metabolism
rmm00550
Peptidoglycan biosynthesis
rmm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rmm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ROSMUCSMR3_01063 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ROSMUCSMR3_01063 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rmm01011
]
ROSMUCSMR3_01063 (murD)
Enzymes [BR:
rmm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
ROSMUCSMR3_01063 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rmm01011
]
Precursor biosynthesis
Amino acid ligase
ROSMUCSMR3_01063 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
TrkA_N
NAD_binding_2
KARI_N
AlaDh_PNT_C
TFX_C
PucR
Motif
Other DBs
NCBI-ProteinID:
ARE82558
UniProt:
A0A1V0RLA7
LinkDB
All DBs
Position
complement(1082220..1083629)
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AA seq
469 aa
AA seq
DB search
MIPVRGYAGAKVAVLGLGRSGLSAARALRAGHAEVLAWDDSETARDTAVAEGFAIVDLAR
AGAFDGVAALIVSPGIPHLYPVPNRVIAAAQEAGVPVDNDIGLFFRSLATDDWDGFDVTP
KVIAVTGSNGKSTTSALIHHVLTEAGRAAQLAGNIGRGVLDIDPPEDSGVVVLELSSYQT
DLARALTPDVAVFTNLSPDHLDRHGGLGGYFAAKRRLFAEGGPDRAVIGVDEAEGRYLAG
QMAEGPNDDRVIRISVDRKLSGFGWSVFARKGFLSEYRHGRQVGSIDLREVKGLPGSHNH
QNACAAYAACRTLGLAPRVIEAGFHSYAGLPHRSQRVAEKDGVIFVNDSKATNVDSALKA
LLAFDNIRWICGGLEKDGGLGGLAPGLAHVRRAYVIGREAAQFAIGLGAVDTEVCTTMSE
AVARAVRDAEPGDVVLLAPAAASFDQYDNFEKRGEDFMAQVHAQLGLGA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgattccggtcagaggatatgcgggtgccaaggttgcggtgctagggcttggacgttcc
ggcctatcggcggcccgtgcgctgcgcgcaggccatgccgaggtgctggcttgggacgat
agcgaaaccgcgcgcgacaccgccgttgccgaggggtttgccatcgtcgatctggcgcgt
gccggtgcgtttgacggggtggcggcgctgatcgtcagtcccggcattccgcatctctat
cccgttcccaaccgtgtcattgccgcagcacaagaggcgggcgttccggtagacaatgat
atcgggctcttttttcgctcgttggccactgacgattgggatggctttgacgtgacgccc
aaggtgatcgccgtcacaggaagcaacggcaaatccaccacttcggccctcattcaccat
gtgttgaccgaggcgggacgggcggcgcaactggcgggcaatatcgggcgcggggtgctg
gacattgatccgcccgaagacagcggcgttgtggtgctcgaactgagcagctatcagacc
gatctggcgcgggcgctgacgccagatgtggcagtattcaccaatctttcgcccgaccat
cttgatcgtcatggcggattggggggctattttgccgccaaacgcaggctttttgccgaa
ggagggccggaccgggcggtgatcggcgtcgatgaggccgaggggcgctatctggcgggg
cagatggccgaggggccgaatgatgaccgcgttatccgtatttcggtggatcgcaagctg
agcggttttggatggtcggtgtttgcgcgtaaggggttcctcagcgaatatcgtcatggg
cgtcaggtggggtcgatcgacctgcgtgaggtcaagggcctgcccggatcgcacaatcat
cagaatgcctgcgccgcctatgcggcctgtcgaaccttgggtctggccccccgcgtgatc
gaggcgggattccacagctatgccggtctgccgcatcgtagccagcgggttgcggaaaaa
gatggcgtcatctttgtgaatgacagcaaggccaccaatgtcgacagcgcgctcaaggcg
ctcttggcgtttgacaatatccgttggatctgtggcgggctcgagaaagacggcggattg
ggcggactggcccccggccttgcgcatgtgcgccgggcctatgtgatcggacgcgaggcg
gcgcagttcgccattgggttgggggctgtcgataccgaggtatgcaccacgatgtccgag
gcggtcgcccgcgctgtccgcgatgcagagccgggggatgtggtgctcttggcaccggct
gcggcgagctttgatcaatatgacaatttcgaaaaacgcggcgaggatttcatggcgcag
gtgcatgcgcagcttgggctaggggcatga
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