Roseovarius mucosus: ROSMUCSMR3_01538
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Entry
ROSMUCSMR3_01538 CDS
T04779
Symbol
gabR
Name
(GenBank) HTH-type transcriptional regulatory protein GabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
rmm
Roseovarius mucosus
Brite
KEGG Orthology (KO) [BR:
rmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmm03000
]
ROSMUCSMR3_01538 (gabR)
Transcription factors [BR:
rmm03000
]
Prokaryotic type
Helix-turn-helix
GntR family
ROSMUCSMR3_01538 (gabR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_36
MarR_2
HTH_24
HTH_29
HTH_11
HTH_41
HTH_50
DIP2311-like_C
Aminotran_5
HTH_Crp_2
DegT_DnrJ_EryC1
TrmB
Motif
Other DBs
NCBI-ProteinID:
ARE83022
UniProt:
A0A1V0RN56
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Position
1551629..1553107
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AA seq
492 aa
AA seq
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MKQAAGALLSAIHLDRSSRKGMSVQLYMALRDIILSGGLRAGDRLPATRTLARETGVSRT
TVIDAVDRLVAEGMLVSQVGSGTFVSDTLEHQPSVPVLTTALDTTAQQPRVSYAINHAEK
SYAQRTWLPHEARAFVTALPALDAFPLAHWSRLSARHLRGARGAVMGYGQPKGYEPLRRA
ITTHLSVLKGIQCHHEQIFITSGAQHAFALIGRLLLNPGDRVWMENPGASGARNALLSEG
AELVPVDVDQDGLIVADGLAKAPHFRMAFVTPSHQQPLGHVMSLARRFELLQAADAAQAV
IVEDDYDGEFYYGNAPQPALRSTDTSGRVIYVGTFSKSLFPSLRLGFVLVPERMTEAFDR
MFRFWASGPPTATQATVADFMDEGHFATHIRLMRRLYKARYEALMEESRILPDCITLQET
ASGFHTPAYLAPGIDAQAVVAQAAERGVVLAPLSKYCLSPIDRSGLVFGFGSAAPEDIRR
GMETLRTLPVLR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaggccgcaggggcgcttttgtccgcgattcatctcgaccgctcgtcgcgcaag
ggcatgagcgtgcaactttacatggcgttgcgcgatatcatcttgtcgggcggtttgcga
gcgggcgaccgcctgcctgcgacgcgcacgctggcgcgcgaaaccggcgtatcgcgcacc
acggtaatcgacgccgttgaccggctggttgccgagggcatgctggtgtcgcaagtgggc
tctggcacttttgtcagcgacacactggaacatcagccctcagtccccgtgctgaccacc
gccttggataccacggcccaacagccccgcgtgtcctatgccatcaaccatgccgaaaag
agctatgcccaacgcacttggttgccccatgaggcccgcgcctttgttacggcgctgccg
gcactcgacgcttttccgctggcgcattggtcgcggctttcggcgcggcacctgcggggc
gcacgcggggcggtgatgggctatggtcagccaaaggggtatgagcctttgcgccgggcg
atcaccacccatctgagcgtgctcaaggggattcagtgtcaccacgagcagattttcatc
acgtctggcgcacagcatgcctttgccttgatcgggcggctgttgctcaatcccggtgat
cgggtctggatggaaaaccccggtgcctcgggcgcgcgcaatgcgctcttgtcggaaggg
gccgaactggtgcctgtcgacgtggatcaggacggattgatcgtggccgacggcttggcc
aaggccccgcatttccgcatggcgtttgtcacaccatcgcaccaacagcctttgggccat
gtcatgtctttggcacgccggttcgagctgttgcaggcggcggacgcagcgcaggcggtg
atcgtagaggatgactatgacggggaattctactatggcaacgcgccccaaccggcgctg
cgcagtacggatacctctggccgcgtgatctatgtcggcaccttttcaaagtcgctcttt
ccatcgcttcggctgggctttgttcttgtgccagagcggatgaccgaagcctttgatcgc
atgttccggttctgggccagcggtccgcccacggcaacgcaggcaaccgttgctgatttc
atggacgagggccattttgccacccatatccggctgatgcggcggctctacaaggcgcgc
tatgaggcgctgatggaggaaagccgcatcctgcccgactgtatcacacttcaggaaacc
gccagcggattccacacgccagcctatcttgcgccaggaattgacgcgcaagcggtcgtg
gcacaggcggcggaacgcggcgttgttctggccccgctttcgaaatactgcctcagcccg
attgaccgatccggcctagtcttcggatttggcagcgcagcccccgaggacattcggcgc
gggatggaaaccctacggaccctacctgtcctgaggtga
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