Roseovarius mucosus: ROSMUCSMR3_01965
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Entry
ROSMUCSMR3_01965 CDS
T04779
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rmm
Roseovarius mucosus
Pathway
rmm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rmm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ROSMUCSMR3_01965 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmm03021
]
ROSMUCSMR3_01965 (rpoA)
03400 DNA repair and recombination proteins [BR:
rmm03400
]
ROSMUCSMR3_01965 (rpoA)
Enzymes [BR:
rmm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ROSMUCSMR3_01965 (rpoA)
Transcription machinery [BR:
rmm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ROSMUCSMR3_01965 (rpoA)
DNA repair and recombination proteins [BR:
rmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ROSMUCSMR3_01965 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF211
Glyco_hydro_65C
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ARE83440
UniProt:
A0A1V0RNT1
LinkDB
All DBs
Position
complement(2025871..2026887)
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLEVKPGNDPLRQAVLIAEPLERGFGLTLGNALRRVLLSSLQGAAIT
AVQIDNVLHEFSSVAGVREDVTDIVLNLKGVAIRMEVEGPKRLSVNAKGPGVVTAGDISD
SAGIEILNKDHVICHLDEGADLFMELTVNQGKGYVSADKNKPEDAPIGLIPIDAIYSPIS
RVSYEVQPTREGQVLDYDKLTMKIETDGSITPDDAVAYAARILQDQLSIFVNFDEPESAS
RQDDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDAF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaattgggctgaattgatcaagccgacacagcttgaagtaaaacccggc
aatgacccgctgcgtcaggcggttctgatcgccgagccgctcgagcgcggctttggtctc
acgctgggtaacgcgctgcgccgcgttcttctgtcttcgctgcaaggtgcggccatcacc
gccgtgcagatcgacaacgtgctgcacgagttctcctcggtggccggtgtccgcgaagac
gtgaccgacatcgttctcaacctcaagggtgttgcgatccgcatggaagtcgaagggccc
aagcgtctttcggtcaatgccaagggtccgggcgttgtcactgccggtgacatctctgac
agcgcgggtatcgagattctcaacaaggatcatgtgatctgccacctcgacgaaggcgct
gacctcttcatggaactgaccgtgaatcagggtaagggctatgtgtcggctgacaagaat
aagcctgaagatgcgcctatcggccttattccgatcgacgccatctattcgccgatctcg
cgcgtcagctatgaggttcaaccgacccgcgaaggtcaggttctggactatgataagctg
acgatgaaaatcgaaaccgacggatcgatcaccccggatgatgccgtggcctatgccgcg
cgcatcctgcaggatcaactgtcgatcttcgtgaacttcgacgaacccgagtcggccagc
cgtcaggatgacgatgacggtctcgaattcaacccgctcctgctcaagaaagtggacgag
ttggaattgtcggtccgttctgccaactgcctcaagaacgacaacatcgtttacatcggc
gatctgatccaaaagaccgaagccgagatgctgcgcacgccgaactttggccgcaagtcg
ctcaacgagatcaaggaagtgctctcgggcatgggcctgcaccttggcatggatgtcgag
gattggccgccagacaatatcgaggacctcgccaagaagttcgaagacgcgttctga
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