Roseovarius mucosus: ROSMUCSMR3_02523
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Entry
ROSMUCSMR3_02523 CDS
T04779
Symbol
dapE
Name
(GenBank) putative succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rmm
Roseovarius mucosus
Pathway
rmm00300
Lysine biosynthesis
rmm01100
Metabolic pathways
rmm01120
Microbial metabolism in diverse environments
rmm01230
Biosynthesis of amino acids
Module
rmm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rmm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ROSMUCSMR3_02523 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rmm01002
]
ROSMUCSMR3_02523 (dapE)
Enzymes [BR:
rmm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
ROSMUCSMR3_02523 (dapE)
Peptidases and inhibitors [BR:
rmm01002
]
Metallo peptidases
Family M20
ROSMUCSMR3_02523 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Secapin
Motif
Other DBs
NCBI-ProteinID:
ARE83992
UniProt:
A0A1V0RQV9
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Position
2587572..2588852
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AA seq
426 aa
AA seq
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MTLPDRLRQEIAARRADLIALTQDLIRIPTRNPPGENYREICDYLDRRLRASGFTTELIR
ATAAPGDSDRHPRWNIVARREGARPGACVHFNSHIDVVEVGHGWSVDPFSGAVIDGKIYG
RGACDMKGGLAASIIAAEAFVATCPDYAGAIEISGTADEESGGFGGVAYLAERGYFSPGR
VDHVIIPEPLGKDRICLGHRGVWWAEIETHGEIAHGSMPFLGDCAVRHMGAVIARMEEQL
FPALAARRTEMPVVPEGARQSTLNINSIHGGEPEQDADYTGLPSPCVPDRCRMVIDRRFL
IEEDIGAVETEIRDLLEALRQGRPGFDYTIRELHRVLPTMTERDAPVVGAVARAVDQVFG
HAADYVVSPGTYDQKHIDRIGRLKNCIAYGPGILDLAHKPDEYVGIDDMEHSARVMALAL
AELLGV
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgccagatcgcctgcgccaggaaatcgctgcgcggcgcgccgacctgatcgcg
ctgacccaagacctgatccgtattccgacgcgcaatccgccgggcgagaattatcgcgag
atttgtgattatctcgaccgtcgtttgcgtgcatcggggttcacgaccgaattgatccgc
gccacagcggcccccggcgacagtgaccggcacccgcgttggaacatcgtggcgcggcgt
gagggcgcgcgccccggcgcttgcgtgcatttcaacagccatatcgacgtggtcgaggtc
ggccatggctggagcgtggacccctttagcggggcggtgatcgacgggaaaatctatggc
cggggcgcctgtgacatgaagggcggacttgcggcaagcatcatcgcggcagaggccttt
gtcgccacctgccccgattacgccggggccatcgagatcagcggcacggcggatgaggaa
tcgggcggctttggcggcgtggcctatctggccgagcgcggctatttcagccccggccgg
gtggatcacgtcatcattccggaacctttgggcaaggatcggatttgccttgggcatcgc
ggtgtctggtgggccgagatcgagacccacggcgagattgcacatggctctatgccgttt
ctgggggattgcgccgtgcgccacatgggcgcggtcatcgcgcggatggaggaacagctt
ttcccggcactggcggcccggcgcaccgagatgcccgtggttcccgagggcgcgcggcaa
tcgacgctcaacatcaattccatccatggcggagagccagagcaagacgccgattacacc
ggcctgcccagcccttgcgtgcccgaccgttgccggatggtgatcgaccggcggttcctg
atcgaagaggatatcggcgcggtcgaaacagaaattcgcgacctgttagaggcgttgcgc
caaggcaggccggggtttgactatacgatccgggaattgcaccgtgtcctgcccacaatg
accgagcgcgatgcgccggtggtgggggcggtggcgcgggcggtggatcaggtgttcggc
catgccgccgattacgtggtcagccccggcacctatgaccagaaacatatcgaccggatc
gggcggctgaagaactgcatcgcctatggtcccggcatcctcgatctggcgcacaagccg
gatgaatatgtggggatcgacgatatggaacactcggcacgcgtgatggcgcttgccctt
gcagagttgctgggggtttga
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