Roseovarius mucosus: ROSMUCSMR3_03333
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Entry
ROSMUCSMR3_03333 CDS
T04779
Name
(GenBank) putative HTH-type transcriptional regulator
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
rmm
Roseovarius mucosus
Brite
KEGG Orthology (KO) [BR:
rmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmm03000
]
ROSMUCSMR3_03333
03036 Chromosome and associated proteins [BR:
rmm03036
]
ROSMUCSMR3_03333
Transcription factors [BR:
rmm03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ROSMUCSMR3_03333
Chromosome and associated proteins [BR:
rmm03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
ROSMUCSMR3_03333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_50
P22_Cro
HTH_24
Csd3_N2
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
ARE84795
UniProt:
A0A1V0RT23
LinkDB
All DBs
Position
complement(3446835..3447749)
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AA seq
304 aa
AA seq
DB search
MPLPPDHLVTLSAILQTGSFEGAAQALGLTQSAISQRLKSLETRVGAQLVHRTTPCTATP
AGQRLAAHADQIALLEARLREDLTGLAPAPQTRLRLAVNADSLATWLPQALASLPDHLFD
LVIDDQDVSHDRLLRGEVLGALTTRASPLPGCDVIALGLLRYQAVASPDFIARHFADGIT
PGRLGVAPMLQFNSHDQLQHRWITQATGVTLSPPCHRLPSSEGFVTAARLGMGWGMAPEA
LLSDDLARGTLHLLRADCPLDTPLYWQWSRLLGTALAPVTRALRRGARLSLRMPQDLTKS
GETL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcccttgccgcctgatcatctcgtcacgctctcggccattctgcaaaccggcagtttc
gagggcgcagcacaggccctcggcctcacacaatcggccatctctcagcggctcaagtcg
ctggaaacccgcgtcggcgcgcagcttgtccatcgcaccacaccctgcactgccacgccg
gccggccaacgccttgccgcccatgccgatcagattgccctgctcgaggcgcgccttcgc
gaggacctcacaggtcttgcccccgcaccgcaaacccggctgcggttggccgtcaatgcc
gacagcctcgccacatggctgccgcaggctttagccagcctgcccgatcacctctttgat
ctggtgatcgacgatcaggatgtctcgcatgaccggctcttgcgcggcgaggttctgggc
gcgctcaccacccgtgccagccccctgcccggctgcgatgtcatcgcactcgggctgctg
cgctatcaggccgtcgccagccccgatttcattgcccgccatttcgcggacgggatcacg
ccgggccgtcttggtgtagcgcccatgttgcaattcaacagccacgatcagttgcaacat
cgctggatcacacaggcaaccggcgtcacgctcagccccccctgtcaccggcttccctcg
tccgaggggttcgtcaccgcagcccgtcttggcatgggctggggcatggcccccgaggcg
ctcttgagcgacgacctggcgcgcggcacactccaccttctgcgcgccgattgcccgctc
gacacgccgctctattggcaatggagccggttgctcggcacggcactcgcgcctgtgacc
cgcgctttgcgtcgtggcgcgcggcttagcctgcgcatgccgcaggaccttacaaaatca
ggggagactctgtaa
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