Ralstonia mannitolilytica: TK49_00080
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Entry
TK49_00080 CDS
T03778
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rmn
Ralstonia mannitolilytica
Pathway
rmn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TK49_00080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmn03400
]
TK49_00080
Enzymes [BR:
rmn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TK49_00080
DNA repair and recombination proteins [BR:
rmn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TK49_00080
Prokaryotic type
TK49_00080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
HTH_21
Motif
Other DBs
NCBI-ProteinID:
AJW43262
LinkDB
All DBs
Position
1:13214..14005
Genome browser
AA seq
263 aa
AA seq
DB search
MTRRAHPAQAALFDEPAADTAAVGFTPLARQFDALPADWKALLTPCIAQTNWPGLCAFVD
GERASGKPIFPTEVFRALHLTSVDDVRVVILGQDPYHGTGTVDGREIPQAHGLAFSVPAG
VRVPPSLRNIYKEIEAEYGCKLPGTSGNLEGWARQGVLLLNTVLTVEQGQAASHAKRGWE
RITDCLLEQLARVGHKRVFMLWGSHAQAKRALLPDGHLVLEAPHPSPLSAHRGFLGCGHF
KRANEWLAAQGQPAIDWLKPQAA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgacgcgcccatcccgcgcaagccgccctcttcgatgagcccgctgcggacacg
gctgccgtgggcttcaccccgctggcccggcagttcgatgccctccccgccgactggaag
gcgctgctcacgccgtgcatcgcgcagaccaactggccggggctttgcgctttcgtcgac
ggggagcgcgcgtcgggcaaaccgatcttcccgaccgaggttttccgcgcgctgcatctg
acgtcggtggacgatgtgcgcgtcgtcatcctgggtcaggacccgtatcacggcaccggc
acggtcgatggccgcgagattccgcaggcgcacggcctggccttttcggtacccgccggc
gtgcgcgtgccgccgagcctgcgcaacatctacaaggaaatcgaagcggaatacggctgc
aagctgccaggcacgtcgggcaacctcgagggctgggcgcggcaaggcgtgctgctgctg
aacaccgtgctcacggtcgagcaaggtcaggccgccagtcacgccaagcgcggctgggaa
cgcatcaccgattgcctgctggaacaactcgcgcgcgtcggccacaagcgcgtgttcatg
ctgtggggcagccacgcgcaggccaagcgcgcgctgctgccggacgggcacctggtgctg
gaagcgccgcatccgtcgccgctgtcggcgcatcgcgggttcttggggtgcgggcatttc
aagcgggcgaatgaatggctcgcggcacagggccaacccgcgattgactggctgaagccc
caggcagcctga
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