Ralstonia mannitolilytica: TK49_00535
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Entry
TK49_00535 CDS
T03778
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rmn
Ralstonia mannitolilytica
Pathway
rmn00300
Lysine biosynthesis
rmn00470
D-Amino acid metabolism
rmn01100
Metabolic pathways
rmn01110
Biosynthesis of secondary metabolites
rmn01120
Microbial metabolism in diverse environments
rmn01230
Biosynthesis of amino acids
Module
rmn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rmn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TK49_00535
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TK49_00535
Enzymes [BR:
rmn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
TK49_00535
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AJW43347
UniProt:
A0AAJ5D7F4
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All DBs
Position
1:107561..108820
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AA seq
419 aa
AA seq
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MSESLIRQAGVLMIEGVALDAIAAQFGTPTYVYSRAALTANYRAYAAACEGRNAHVQYAM
KANSNLAVLQVFAQLGAGFDIVSSGELKRVLAAGAPASKVVFSGVGKSADEMRFALEAGV
ACFNVESIPELHRLNDVAGSMGKAAPVSLRINPDVDAKTHPYISTGLKGNKFGVAFDEVL
PTYRAAAAMPNLRVVGIDCHIGSQITEVSPYLDALDKVLDVVAKLDADGIRLSHIDVGGG
LGITYTDETPPDITAFARTLLDRIEQRGFGDRTVLFEPGRSLVGNAGLLLTRVEYLKPGA
SKNFCIVDAAMNDLARPAMYEAYHHIVPVREGESAPVMYDVVGPVCESGDWLGRDRSLAV
QSGDLLAVLSAGAYGFTMSSNYNTRNRAAEVIVDGDKVHLVRERERFEDLIRGEHLLPA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtccctgatccgccaggctggcgtcctgatgatcgaaggcgtcgcgctcgac
gcgattgccgcccagtttggcacgcctacctacgtgtattcgcgcgccgcgctcaccgcc
aactaccgcgcgtacgccgcggcctgcgagggccgcaatgcccacgtgcagtacgcgatg
aaggcgaactcgaacctggccgtgctgcaggtgttcgctcagctcggcgccggtttcgac
atcgtctcgtcgggcgaactcaagcgcgtgctggccgccggtgcaccggcatcgaaggtc
gtgttctcgggcgtgggcaagagcgcggacgaaatgcgcttcgcgctggaagccggcgtg
gcctgcttcaacgtcgaatccattccagagctgcaccgcctgaacgacgtagccggctcg
atgggcaaggccgcgcccgtgtcgctgcgcatcaacccggacgtggacgccaagacgcac
ccgtacatctcgacgggcctgaaggggaacaagtttggcgtggccttcgacgaggtgctg
ccgacgtaccgcgccgccgcggccatgccgaacctgcgcgtcgtcggcatcgactgccac
atcggctcgcagatcaccgaggtctcgccgtacctcgatgcgctggacaaggtgctcgac
gtggtggccaaactcgacgccgacggcatccgcctgtcgcacatcgacgtgggcggcggt
ctgggcatcacctacaccgatgagacgccgccggacatcaccgcgtttgcccgcacgctg
ctcgaccgcatcgagcagcgcggctttggcgaccgcaccgtgctgttcgagcccggccgc
tctctggtgggcaatgccggcctgctgctcacgcgcgtcgaatacctcaagcccggcgcg
agcaagaacttctgcatcgtcgatgcggccatgaacgaccttgcccgcccggcgatgtac
gaggcgtatcaccacatcgtgccggtgcgcgaaggcgaaagcgcgccggtcatgtacgac
gtggttggcccggtctgcgaatcgggcgactggctgggccgcgaccggtcgctggccgtg
cagtcgggcgacctgctggccgtcctgtcggccggcgcgtacggcttcacgatgagctca
aactacaacacgcgcaatcgcgccgcagaggtgatcgtcgatggcgacaaggtgcacctg
gtgcgcgagcgcgagcgctttgaagacctgatccgcggcgagcatctgctgccggcataa
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