Ralstonia mannitolilytica: TK49_00605
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Entry
TK49_00605 CDS
T03778
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rmn
Ralstonia mannitolilytica
Pathway
rmn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rmn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TK49_00605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmn03021
]
TK49_00605
03400 DNA repair and recombination proteins [BR:
rmn03400
]
TK49_00605
Enzymes [BR:
rmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TK49_00605
Transcription machinery [BR:
rmn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
TK49_00605
DNA repair and recombination proteins [BR:
rmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
TK49_00605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AJW43361
UniProt:
A0A0D5AKG2
LinkDB
All DBs
Position
1:complement(121787..122767)
Genome browser
AA seq
326 aa
AA seq
DB search
MQTALLKPKIIAVEPLGDHHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTIDGVQEDVVNLLLNLKGVVFKLHNRDEVTVSLRKEGEGVVTAADIELPHDVEI
INPGHVIANLSAGGKLDLQLKVEQGRGYVPGNVRKFGDESSKVIGRIVLDASFAPVRRVS
YAVESARVEQRTDLDKLVMNIETNGVISPEEAIRQSARILVDQLSVFAALEGTESAAEAA
AARAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNE
IKEVLASRGLTLGMKLENWPPAGLEK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacagcactcctgaagcccaaaattattgcggttgagccgcttggcgatcatcac
gcgaaggtcgtcatggaaccgttcgagcgcggctatggccacacgctcggcaacgcgctg
cgccgcgtgctgctgtcgtcgatggtcggctatgccccgaccgaagtcacgatcgctggg
gtcgtccacgaatattccaccatcgatggcgtgcaggaagacgtcgtcaacctgctgctg
aacctcaagggcgtggtgttcaagctgcacaaccgtgatgaagtcacggtgtcgctgcgc
aaggaaggcgagggtgtggtgacggccgccgatatcgagctgccgcacgacgtcgagatc
atcaacccgggccacgtgatcgccaacctgtcggctggcggcaagctggatctgcagttg
aaggtcgagcagggccgcggctatgtgccgggcaacgtgcgcaagttcggcgacgagtcg
agcaaggtcatcggccgcatcgtgctggacgcctcgttcgcaccggtgcgccgcgtgtcg
tacgcggtggagtctgcccgtgtggagcagcgtaccgacctcgacaagctggtcatgaac
atcgagaccaacggcgtgatctcgccggaggaagcgattcgccagtcggctcgcattctg
gtggatcaactctcggtgttcgctgccctggaaggcaccgaaagcgccgctgaggccgcc
gctgcccgcgctccgcagatcgacccgatcctgctgcgcccggttgacgacctcgagctc
acggtgcgttcggccaactgcctgaaggccgaaaacatctactatatcggcgacctgatc
cagcgtaccgagaacgagctgctcaagaccccgaacctgggtcgcaagtcgctcaacgag
atcaaggaagtcctcgcttcgcgtggcctgacgctcggcatgaagctcgagaactggccg
cccgcaggtctcgagaagtaa
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