Ralstonia mannitolilytica: TK49_03600
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Entry
TK49_03600 CDS
T03778
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rmn
Ralstonia mannitolilytica
Brite
KEGG Orthology (KO) [BR:
rmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmn03032
]
TK49_03600 (gyrB)
03400 DNA repair and recombination proteins [BR:
rmn03400
]
TK49_03600 (gyrB)
Enzymes [BR:
rmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TK49_03600 (gyrB)
DNA replication proteins [BR:
rmn03032
]
Prokaryotic type
DNA Topoisomerases
TK49_03600 (gyrB)
DNA repair and recombination proteins [BR:
rmn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TK49_03600 (gyrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AJW43880
LinkDB
All DBs
Position
1:750946..753474
Genome browser
AA seq
842 aa
AA seq
DB search
MTEEQKPQSTPADGSSYGAASIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSI
DEALAGHCTEIHVTIHTDNSISVVDNGRGIPTGIKFDDKHEPKRSAAEIVMTELHAGGKF
DQNSYKVSGGLHGVGVSCVNGLSKWLKLTIRRDGKVHQMDFARGIPQNRLLETMEAPDGK
MVEVSPLRVSGTTDKRGTEVHFLADEEIFTNVEYHYEILSKRIRELSFLNNGVHIKLTDQ
RTGKEEDFAFSGGVKGFVEYINKNKSVLHPTIFHAQGEKDGVGVEVSMQWNDGFNEQVLC
FTNNIPQRDGGTHLTGLRAAMTRVINKYITDNEIAKKAKVETSGDDMREGLTCVLSVKVP
EPKFSSQTKDKLVSSEVRLPVEDIVSKALAEFLDETPNDAKIICGKIVEAARAREAARKA
REMTRRKGVLDGMGLPGKLADCQEKDPALSELFIVEGDSAGGSAKQGRDRKFQAILPLKG
KILNVERARFDKMLSSQEVLTLITAMGTGIGKDDYNLDKLRYHRIIIMTDADVDGSHIRT
LLLTFFYRQMPEIIERGHVYIAQPPLYKIKHGKEERYIKDDNEMAAYLVRQALDTAALVR
ADGTEISGDALAELARQYQLSRGVIERLSRVIDADALRAIAEGVALDLSNEAAAEASARA
LKARLLEMQGNASNANGGATADAFMQYDEKTEKYRVMVVRRQHGNQRLSHIDADFVAGAD
YAALAQTAQTFQGLIGEGAKVRRGTGDKLREQPVSDFHAAMTWLLSEAERGVSRQRYKGL
GEMNPEQLWETTMDVTQRRLLRVQIEDAIAADQIFTTLMGDDVEPRRNFIETNALVARNI
DV
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagagcagaaaccgcaatccacccccgccgacggcagcagctacggcgccgcc
tcgatccagatcctggaaggcctggaggcggtacgcaagcggccgggcatgtacatcggc
gacacgtccgacggcactggcctgcaccacctcgtcttcgaggtgctggacaactccatc
gacgaagcgctggccggccattgcaccgagatccacgtcaccatccacaccgacaactcc
atctcggtggtggacaacggccgcggcatcccgaccggcatcaagtttgacgacaagcac
gagcccaagcgcagcgcggccgaaatcgtcatgaccgagctgcacgccggcggcaagttc
gaccagaacagctacaaggtctcgggcggcctgcacggcgtgggcgtgtcttgcgtcaac
ggcctgtcgaagtggctcaagctgacgatccgccgcgacggcaaggtccaccagatggac
ttcgcgcgcggcattccgcagaaccgcctgctggaaaccatggaagcgccggacggcaag
atggtcgaagtctcgccgctgcgtgtgtcgggcaccaccgacaagcgcggcaccgaagtc
cacttcctggccgacgaagagatcttcaccaacgtcgaataccactacgagatcctctcc
aagcgcatccgcgagctctcgttcctgaacaacggcgttcacatcaagctgaccgaccag
cgcactggcaaggaagaagacttcgccttctcgggcggcgtgaagggctttgttgagtac
atcaacaagaacaagagcgtgctgcacccgaccatcttccacgcccaaggcgagaaagac
ggcgtgggcgttgaagtgtcgatgcaatggaacgacggcttcaacgagcaggtgctctgc
ttcaccaacaacatcccgcagcgcgacggcggcacccacctcacgggcctgcgcgccgcc
atgacgcgcgtcatcaacaagtacatcaccgacaacgagatcgccaagaaggccaaggtc
gagacctcgggcgacgacatgcgcgaaggcctgacctgcgtgctgtccgtcaaggtgccg
gagcccaagttcagctcgcagaccaaggacaagctcgtctcgtcggaagtgcgcctgccg
gtggaagacatcgtcagcaaggcgctggccgagttcctggatgaaacgcccaacgacgcc
aagatcatctgcggcaagatcgttgaagccgcccgcgcgcgtgaagccgcccgcaaggcc
cgcgagatgacgcgccgcaagggcgtgctcgacggcatgggcctgcccggcaagctggcc
gactgccaggagaaagaccccgcgttgagcgaactcttcatcgtcgagggtgactccgca
ggtggatcggccaagcagggccgcgaccgcaagttccaggcgatcctgccgctcaagggc
aagatcctgaacgtcgagcgcgcgcgctttgacaagatgctctccagccaggaagtgctc
acgctcatcaccgccatgggcaccggcatcggcaaggacgactacaacctcgacaagctg
cgctaccaccgcatcatcatcatgaccgatgctgacgtggacggctcgcacatccgcacg
ctgctgctcacgttcttctaccgccagatgcccgagatcatcgagcgcggccacgtgtac
atcgcccagccgccgctctacaagatcaagcacggcaaggaagagcgctacatcaaagac
gacaacgagatggccgcctacctcgtgcgccaggcgctggacaccgccgccctcgtgcgt
gccgatggcaccgagatctcgggcgacgccctggccgaactcgcgcgccagtaccagctc
agccgcggcgtgatcgagcgcctgtctcgcgtgattgacgccgacgccctgcgcgccatt
gccgaaggcgtggccctggacctcagcaacgaagccgcagccgaggccagcgcccgcgcg
ctcaaggcccgcctgctggaaatgcaaggcaacgccagcaacgccaacggcggcgccacg
gccgacgccttcatgcagtacgacgagaagacggagaagtaccgcgtgatggtcgtgcgc
cgccagcacggcaaccagcgcctcagccacatcgacgccgacttcgtggccggcgccgac
tacgccgccctggcccagaccgcccagaccttccaaggcctgattggcgaaggcgccaag
gtacgccgcggcaccggcgacaagctgcgcgagcagcccgtgtctgacttccacgccgcc
atgacgtggctgctgagcgaagccgagcgcggcgtgagccgccagcgctacaagggcctg
ggcgaaatgaaccccgagcagctgtgggaaaccaccatggacgtcacccagcgccgcctg
ctgcgcgtgcagattgaagacgccattgcggcggaccagatctttacgacgctgatgggc
gacgacgtggagccgcgccggaacttcattgagacgaatgcgttggtggcgcggaatatt
gacgtctaa
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