Ralstonia mannitolilytica: TK49_05580
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Entry
TK49_05580 CDS
T03778
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
rmn
Ralstonia mannitolilytica
Pathway
rmn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TK49_05580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmn03400
]
TK49_05580
Enzymes [BR:
rmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TK49_05580
DNA repair and recombination proteins [BR:
rmn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TK49_05580
RecFOR pathway proteins
TK49_05580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
nSTAND3
AAA_16
AAA_3
AAA_22
Rad17
AAA_14
AAA_18
RNA_helicase
NTPase_1
TsaE
AAA_33
Sigma54_activ_2
AAA_17
DUF815
Bac_DnaA
NB-ARC
ABC_tran
AAA_28
bpMoxR
IstB_IS21
NACHT
AAA_24
AAA_25
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
AJW44225
UniProt:
A0AAJ4ZJ44
LinkDB
All DBs
Position
1:complement(1155512..1156585)
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AA seq
357 aa
AA seq
DB search
MIETDKLAAKAVSAERIISASPASPNEEAFERALRPKLLDEYVGQEKVRGQLDIFMTAAK
QRSEALDHVLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERPGDLAALLTNLEANDV
LFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTN
PLRDRFGIVARLEFYTPAELTKIVTRSAGLLNARIAEDGALEIAKRSRGTPRIANRLLRR
VRDYAEVKADGVITREVADAALAMLDVDAVGFDLMDRKLLEAILHKFNGGPVGIDNLAAA
IGEERDTIEDVLEPYLIQQGYLQRTPRGRVATASAYQHFGLGAPKSGPVRDLWDDNN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaccgacaagctcgccgccaaggctgtctctgctgagcgcatcatctcagcc
tcccccgcctcccccaacgaggaggcgttcgagcgcgcgctgcgccccaagctgctcgac
gaatatgtcggccaggaaaaggtgcgcggccagctcgacatcttcatgacggcggccaag
cagcgcagcgaagcgctggaccacgtgctgctgttcggcccccccggtctgggcaagacg
acgctggcgcacatcatcgcgcgcgagatgggcgtcaacctgcgccagacttcgggcccc
gtgctggagcggcccggcgatctggccgcgctgctcaccaacctcgaagccaacgacgtc
ctcttcatcgacgagattcatcggctctcgcccgtggtggaggaaatcctgtacccggcg
ctggaggactaccagatcgacatcatgattggcgagggcccggcggcgcgctcggtcaag
ctcgatctgcagccgttcacgctggtgggggccaccacgcgggccggcatgctgaccaac
ccgctgcgcgaccgcttcggcatcgtcgcgcggctggagttctacacgcctgccgagctg
acgaagatcgtcacgcgctcggcgggcctgctcaacgccaggatcgccgaagacggcgcg
ctggaaatcgccaagcgctcgcgcggcacgccgcgtatcgccaaccgtctgctgcgccgc
gtacgtgactacgccgaggtcaaggccgacggcgtcatcacgcgcgaagtcgccgatgcc
gcactggcgatgctcgatgtggatgccgtcggcttcgacctgatggaccgcaagctgctc
gaagcgatcctgcacaagttcaacggcgggccggtcggcatcgacaacctggcggcagcc
atcggcgaagagcgcgacacgatcgaagacgtgctcgagccgtacctgatccagcagggc
tacctgcagcgcacgccgcgcggccgcgtggctacggcatcggcgtaccagcacttcggg
ctgggcgcgccaaagagcggcccggtgcgcgatctctgggacgacaacaactag
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