Ralstonia mannitolilytica: TK49_06505
Help
Entry
TK49_06505 CDS
T03778
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
rmn
Ralstonia mannitolilytica
Brite
KEGG Orthology (KO) [BR:
rmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rmn03016
]
TK49_06505
Enzymes [BR:
rmn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
TK49_06505
Transfer RNA biogenesis [BR:
rmn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TK49_06505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AJW44395
LinkDB
All DBs
Position
1:1366543..1368621
Genome browser
AA seq
692 aa
AA seq
DB search
MQLLFEEGGEIRAGTVLSQQGEAYQVELPSAKRTKVKSRDVLLQFAQPSAGELSQAAQAL
STEIDLDFLWECAPADEFGFTDLAAEYFGAGADATQQAALALALHGAPIYFRRKGRGRYQ
RAPEDQLKAALAGLERKKQQAALQAEYEAELKAMRLPEAFRGKTLQLLFKPDKNSLEYKA
LDAACTALGLSPMRLMVAVGGIANARALHEARFLSECFPKGTGFPEVAVPEPALELPAAD
VRAFSIDDVTTTEIDDAISVTPIDDTTVRIGIHIAAPGFGIQRGDALDAIARQRLSTVYF
PGDKITMLPESVVDRYTLQEGRACPSLSLYVTVDRTTWTVTASQTRCESVTVAANLRHNL
LEEVITAEALAEGSGEYPFKAELAVLWPFACALYDARQQARIASGLKPEGAQRGDYSFYI
DPIPEAEGGGERVRIEQRKRGSPLDKIVAELMILANSTWGRMLADAGVPGIYRTQKAWGM
HRTRMQTYPAPHEGLGVAQYAWSTSPLRRYVDLVNQWQIAAVAQHGVTAKLVAPFKPKDA
DLLAAVADFEATYAAYADHQSTMERYWCLRWLKQENRTRMPAVVLKDGAVRFAEIPLVTK
VPELAQAARGTHVVLDILDTDEIGLEVSCRVVEILAPAADAEAEAEAMEEELAEAPAEPQ
PGADGEEAHAEAETAVAPPPQDGETGGTPAAA
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgctgttcgaagaaggcggcgagatccgcgcgggcaccgtcttgtcccaacag
ggcgaggcctaccaggtcgagttgccgagtgccaagcgcaccaaggtcaaatcccgggac
gtgttgctgcagttcgcccagccgtcggcgggcgagctgtcgcaggctgcgcaggcgctg
tcgacagagatcgatctggatttcctgtgggagtgcgcccccgccgatgagtttggcttt
accgatctggcggccgagtatttcggcgccggggcagatgccacccagcaagcggcgctg
gccctcgcgctgcatggcgcacccatctacttccgccgcaagggccgcggccggtaccag
cgtgcgccggaagatcagctgaaggccgcgctggcaggcctcgagcgcaagaagcagcaa
gccgcgctgcaggccgaatacgaggccgagctcaaggccatgcgcctgcctgaagcgttc
cgcggcaagacgctgcagctgctgttcaagccggacaagaacagcctcgaatacaaggcg
ctcgatgcggcatgcacggcgctgggcctgtcgccgatgcgcctgatggtggcggtcggc
ggcattgccaatgcgcgcgcgctgcacgaagcgcgcttcctctcggagtgcttcccgaag
ggcaccggctttccggaggtagccgtgccggaaccggcgttggagttgccggcggccgat
gtgcgcgcgttctccattgacgacgtgaccaccaccgagatcgacgacgccatctcggtc
acgccgatcgacgacacgacggtgcgcatcggcatccacatcgccgcgccgggcttcggc
atccagcgcggcgatgcgctcgatgcgatcgcccgccagcgcctgtcgaccgtgtacttc
cccggcgacaagatcacgatgctgccggaatcggtggtcgatcgctacacgctgcaggaa
gggcgcgcgtgcccatcgctgtcgctgtatgtgacggtcgaccgtaccacgtggacggtg
accgccagccagacgcgctgcgaatctgtgacggtggcggccaacctgcgccacaacctg
ctcgaggaggtcatcaccgccgaggccctggccgaaggctcgggcgagtacccgttcaag
gcggagctggctgtgctgtggccgtttgcctgcgcgttgtacgacgcgcgtcagcaggca
cgcattgccagtggcctgaaacccgagggtgcgcagcggggcgattactcgttctacatc
gacccgatccccgaggccgaaggcggcggcgagcgcgtacgcatcgagcagcgcaagcgc
ggctcgccgctggacaagatcgtcgccgagctgatgatcctggccaacagcacgtggggt
cgcatgctggcggacgccggcgtgcctggcatctatcgcacgcagaaggcgtggggcatg
caccgcacgcgcatgcagacgtatcccgcgccgcacgagggcctgggcgtggcgcaatac
gcgtggagcacgtcgccgctgcgccgctacgtcgacctcgtgaatcagtggcagattgct
gcggtggcgcagcatggcgtcacggccaagctggttgcgcccttcaagcccaaagacgcc
gacctgctggccgccgtggccgatttcgaagcgacctacgccgcttacgccgatcatcag
tcgaccatggagcgctactggtgcctgcgctggctgaagcaggaaaaccgcacgcgcatg
ccggctgtggtgctcaaggacggcgccgtgcgcttcgccgagattccgctggtgaccaag
gtgccggaactggcacaggccgcgcgcggcacgcacgtcgtgctcgacatcctggacacc
gatgagatcggcctggaggtgtcgtgccgcgtggtggaaatccttgcgcctgccgcggac
gccgaagccgaagccgaggcgatggaagaagaactggccgaagccccggccgaaccacaa
cctggcgccgatggggaagaggcgcatgccgaagccgagacagctgtggcgccgccgccg
caggatggcgagaccggtggaacgcccgcggccgcataa
DBGET
integrated database retrieval system
