Ralstonia mannitolilytica: TK49_09285
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Entry
TK49_09285 CDS
T03778
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
rmn
Ralstonia mannitolilytica
Pathway
rmn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TK49_09285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmn03400
]
TK49_09285
DNA repair and recombination proteins [BR:
rmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TK49_09285
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TK49_09285
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
DUF7603
Orbi_NS3
AAA_16
DUF6779
Motif
Other DBs
NCBI-ProteinID:
AJW44880
UniProt:
A0AAJ5D593
LinkDB
All DBs
Position
1:1947581..1949671
Genome browser
AA seq
696 aa
AA seq
DB search
MTDLSQVPSPYDESKFVTFEGSPFQLYQPYPPAGDQPEAIRKLVENIEDGLSYQTLLGVT
GSGKTYTMANVIARVGRPAIVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSSINEHIEQMRLSATKSLLERRDVVIVATVSAIYGIGNPSEYHQMILTL
RAGDKVSQRDVIARLIAMQYTRNETDFQRGTFRVRGDTVDIFPAEHAEMAVRLELFDDEV
ESLQLFDPLTGRVRQKIPRFTVYPSSHYVTPRETVLRAIETIKAELRERLDFFYKENKLV
EAQRLEQRTRFDLEMLQELGFCKGIENYSRHLSGSAPGEPPPTLVDYLPPDALMFLDESH
VLIGQLNGMYNGDRARKETLAEYGFRLPSALDNRPLKFAEFETKMRQVTFVSATPGDYEK
AKAGTEVVEQVVRPTGLVDPVIQVRPATTQVDDLLSEIHLRVEAGERVLVTTLTKRMAEQ
LTEFLSENGIKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAIL
DADKEGFLRAERSLIQTIGRAARNVNGTAILYADRITDSMRKAIDETERRRAKQIAYNEA
HGITPRGVVKRIKDIIDGVYNVDEARAELRAAQEAAKYEDMSEKQASKEIKRLEKQMLDH
AKNLEFEKAAQVRDQLAKLKSQLFGASGEDHIVPTA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacctgagccaagtccccagcccgtacgacgaatcgaaatttgtgacgttcgag
ggctcgccgttccagctgtaccagccgtatccaccggccggcgaccagcccgaggccatc
cgcaagcttgtcgagaacatcgaggacggcctgtcgtaccagacgctgctgggcgtcacg
ggctcgggcaagacgtacaccatggccaatgtgatcgcgcgcgtggggcgcccggcgatc
gtgtttgcgcccaacaagacgctggcggcgcagctgtattcggagttccgcgagttcttc
ccgcgcaacgcggtcgagtacttcgtctcgtactacgactactaccagcctgaagcctat
gtgccgcagcgcgatctcttcatcgagaaggattcgtcgatcaacgagcacatcgagcag
atgcggctctcggccaccaagagcctgctggagcgccgcgacgtggtgatcgtggcgacc
gtctcggccatctacggtatcggcaacccgagcgaataccaccagatgatcctgacgctg
cgcgcgggcgacaaggtgagccagcgcgacgtgatcgcacgcctgatcgccatgcagtac
acgcgcaacgagacggatttccagcgcggcaccttccgcgtgcgcggcgatacggtggac
atctttcccgctgagcatgcggagatggctgtgcgcctggagctgttcgacgacgaagtc
gaatcgctgcagctgttcgatccgctgacgggccgcgtgcggcagaagattccgcgcttc
accgtctacccgtcgagccactacgtgacgccgcgcgagaccgtgctgcgcgccatcgag
accatcaaggccgaactgcgcgagcggctcgatttcttttacaaggagaacaagctcgtg
gaggcgcagcggctggagcagcgcacgcgcttcgatctcgagatgctgcaggagctgggc
ttctgcaagggcatcgagaactactcgcggcacctgtcgggctcggcgccgggcgagccg
ccgccgacgctcgtcgactatctgccgcccgatgcgctgatgttcctggatgaatcgcac
gtgctgatcggccagctcaacggcatgtacaacggcgaccgcgcacgcaaggaaacgctg
gccgaatacggcttccgcctgccttccgcgctggacaaccggccgctcaagttcgccgag
ttcgagaccaagatgcggcaggtgacgttcgtctcggccacccccggcgattacgagaag
gcgaaggccggcaccgaggtcgtcgagcaggtcgtgcgccccacggggctggtcgacccg
gtcatccaggtgcgcccggccacgacgcaggtcgacgatctgctgtcggaaatccatctg
cgcgtcgaggccggcgagcgcgtgctggtgaccacgctgaccaagcgcatggctgagcag
ctgacggaattcctgtcggaaaacggcatcaaggtgcgctacctgcactcggacatcgac
accgtcgagcgcgtggagatcatccgcgacctgcgcctcggtacgttcgacgtgctggtc
gggatcaacctgctgcgcgaggggctggatattccggaggtgtcgctcgtggcgatcctg
gacgccgacaaggaaggcttcctgcgtgccgagcgctcgctcatccagaccatcgggcgc
gcggcccggaacgtgaacggcaccgccatcctgtatgcggaccgcatcaccgattcgatg
cgcaaggcgatcgacgagaccgagcgccgccgcgccaagcagatcgcctacaacgaggcg
catggcattacgccgcgcggcgtggtcaagcgcatcaaggacatcattgacggcgtgtac
aacgtcgacgaggcgcgcgccgaactccgggccgcgcaagaggccgccaagtacgaggac
atgagcgagaagcaggcgtccaaggaaatcaagcgcctcgagaagcagatgctcgaccat
gccaagaacctcgaattcgagaaggcggcgcaggtgcgcgatcagctggccaagctgaag
tcgcaactgttcggcgcgagcggcgaagaccacatcgtcccgaccgcctga
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