Ralstonia mannitolilytica: TK49_10145
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Entry
TK49_10145 CDS
T03778
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
rmn
Ralstonia mannitolilytica
Brite
KEGG Orthology (KO) [BR:
rmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmn03021
]
TK49_10145
Transcription machinery [BR:
rmn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TK49_10145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HTH_Crp_2
HTH_20
KORA
Motif
Other DBs
NCBI-ProteinID:
AJW45033
UniProt:
A0AAJ5D544
LinkDB
All DBs
Position
1:2127777..2128910
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AA seq
377 aa
AA seq
DB search
MPRQKAATPATPVDENVDAVEGQSTRNGRGGRRARGAAQPPTEDIEVAETLVDEAPGAES
ADLADVSDSIDEPEEDEEESGEAEEAAPEEDFRKVLQAELAADTVQHYLNRISIKPLLTP
AEELHFSTLAKAGEFTARQVMIERNLRLVVSIAKGYLNRGVPLLDLIEEGNLGLMHAIEK
FDPERGFRFSTYATWWIRQSIERAIMNQARTVRLPVHVIRELNQVLRAKRHLEKGGIDGR
DASLEDIAHLLGKTTEEVQDVLSLNEHTTSLDTPFDLDPGTSLLDFLSDEHGASPDQEVA
HRELSQLMKSWLARLSDKHRYVVERRFGLNHIEPATLEELAAEMGLTRERVRQIQQEALV
KLKRHFASQGVRKDAVL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccagaaagccgccacgcccgccacccccgtcgatgaaaacgtcgatgctgta
gagggccaaagcacccgtaacgggcgcggggggcggcgtgctcgcggtgcggcgcaacct
ccgacggaagacattgaagtcgccgagacgctggtcgacgaggcgcctggcgctgaatcg
gccgaccttgccgatgtgtccgacagcatcgacgagcccgaggaagacgaggaagagtct
ggcgaagccgaggaggcggcgccggaagaggatttccgcaaggtgctgcaggcagagctg
gctgctgatacggtccagcactacctgaatcgcatcagcatcaagccgctgctgacgccg
gccgaggaactgcatttctcgacgctggccaaggctggcgagttcaccgcccgccaggtc
atgatcgagcgcaatctgcgcttggtcgtgagcattgcaaagggttatctgaaccgcggc
gttccgcttctcgacctgatcgaagagggcaacctcggcttgatgcatgccatcgagaag
ttcgatccggaacgcggtttccgcttttcgacctacgcgacatggtggatccgccagagc
atcgagcgcgcgatcatgaaccaggcgcgcaccgtccgcttgccggtgcacgtgatccgc
gaactcaaccaggtgctgcgcgccaagcgccatcttgagaagggcgggatcgacggccgc
gacgcgagccttgaagatatcgcccacctgctcggcaagacgacggaagaagtccaggat
gtgctgtccctcaacgagcacacgacttcgctggatacgccgtttgacctcgatcctggc
accagcctgctcgactttctgtcggacgaacacggcgcgtcgccggaccaggaagtcgcg
catcgcgagttgtcgcagctgatgaagtcgtggctggctcgcctctctgacaagcatcgc
tatgtggtggagcgccgcttcggcctgaaccatatcgagcccgccacgctggaagagctc
gccgctgaaatggggctgacccgcgaacgcgtgcgccagatccagcaagaagcgctggtc
aagctcaagcgccacttcgcctcgcagggcgtgcgcaaggacgcggtgctgtaa
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