Ralstonia mannitolilytica: TK49_11340
Help
Entry
TK49_11340 CDS
T03778
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rmn
Ralstonia mannitolilytica
Brite
KEGG Orthology (KO) [BR:
rmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rmn03016
]
TK49_11340
Enzymes [BR:
rmn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
TK49_11340
Transfer RNA biogenesis [BR:
rmn03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
TK49_11340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Acb1
Motif
Other DBs
NCBI-ProteinID:
AJW45247
LinkDB
All DBs
Position
1:2383724..2384392
Genome browser
AA seq
222 aa
AA seq
DB search
MRATRLSAGRHAGVDNGWIASPAFDDPAVTQLTLPGFEATPQLPAHRLFLAIKPDVDTAE
RIARLIQQLRPVVGFKGKALRAERLHVTLHHLGDFVHLPPDDVVARVRAAAAGLALPAFD
ATFNQVVSFHGRRDHRPFVLLGDEGVGGLMAFQAALGEALQHAAVPVPRGHFKPHITLLY
DRGGFAPKAVEPITWTVREFVLIHSWLGKTRYDELGRWALKG
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcaacacgactttcagcgggacgtcatgcgggcgtcgataatgggtggatcgcc
agcccggcgtttgacgaccctgccgtgacccagctcactcttcccggattcgaagccact
ccgcaattgcccgcgcatcgcctgtttctggcgatcaagcctgacgtggataccgccgag
cgcatcgcgcggctgatccagcaattacggcccgtcgtgggtttcaagggcaaggcgctg
cgtgcggagcgcctgcatgtcacgctgcatcaccttggcgatttcgttcatctgccgcct
gacgacgtcgtggcgcgtgtgcgtgcagcagcggccggcctcgcgttgccggcattcgac
gccacgttcaaccaggtggtgagctttcatggccggcgcgaccatcggccgttcgtgctg
ctgggcgacgaaggcgtgggcggcttgatggcgtttcaggcggcgctgggcgaggcactc
cagcatgccgcggtgccggtgccgcgcgggcatttcaagccgcacatcacgctgttgtat
gaccgcggcggctttgcgccgaaagcggtcgagcccatcacgtggaccgtgcgcgagttc
gttctcatccatagctggctaggcaaaacgcgctacgacgaacttggccgctgggcgctc
aaaggctga
DBGET
integrated database retrieval system
