Ralstonia mannitolilytica: TK49_12395
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Entry
TK49_12395 CDS
T03778
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rmn
Ralstonia mannitolilytica
Pathway
rmn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TK49_12395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmn03400
]
TK49_12395
Enzymes [BR:
rmn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
TK49_12395
DNA repair and recombination proteins [BR:
rmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
TK49_12395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
BrxR_CTD
Motif
Other DBs
NCBI-ProteinID:
AJW45436
LinkDB
All DBs
Position
1:2623732..2624541
Genome browser
AA seq
269 aa
AA seq
DB search
MRVATWNVNSLKVRLPHVLQWLAQREADATPIDLLCLQELKLPDDRYPLAELDAAGYASL
FTGQKTYNGVAILSRKAAVPEGRDVVKNIPGFEDEQQRIVAATYDMADGPVRVISAYFPN
GQALGSDKMAYKMRWLAALQDWLKTEMAAHPRLMLLGDFNIAPDDRDVHDPKKWEGQNLV
SPEERAAFRALEGAGLVDAFRMFDQEDRLFSWWDYRLFAFKRNAGLRIDHIMLSPELAKL
CESCHIDRVPRTWEQPSDHTPVVAALRSA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcgccacttggaacgttaactccctgaaggttcgcctgccgcacgtgctccaa
tggctggcccagcgcgaagccgacgccacgcccatcgatctgctctgcctccaggagctc
aaactgcccgatgaccgctacccgctggccgagcttgacgccgccggctatgcgtccctg
ttcacgggccagaaaacgtacaacggcgtcgccatcctctcgcgcaaggccgccgtgccc
gagggccgcgacgtggtcaagaacatccccggcttcgaggacgaacagcagcgcatcgtg
gccgccacgtacgacatggcggatggcccggtgcgcgtgatctctgcctacttccccaac
ggccaggcgctcggctccgacaagatggcctacaagatgcgctggctggccgcgctgcag
gactggctgaaaaccgaaatggccgcccatccgcggctgatgctgctgggcgatttcaac
atcgccccggacgaccgcgacgtgcacgacccgaaaaagtgggagggccagaacctggtg
tcgccggaagagcgggccgcgtttcgtgcgctggaaggcgccgggctcgtcgatgccttc
cgcatgttcgatcaggaagacaggctcttctcgtggtgggactaccggctctttgccttc
aagcgcaacgccggcctgcgcatcgaccacatcatgctgtcccccgagctggccaagctg
tgcgagtcgtgccatatcgaccgcgtgccgcgcacctgggagcagccgtccgaccacacg
ccggtggtcgccgcactgcgcagcgcgtga
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