KEGG   Ralstonia mannitolilytica: TK49_14605
Entry
TK49_14605        CDS       T03778                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
rmn  Ralstonia mannitolilytica
Pathway
rmn03030  DNA replication
rmn03410  Base excision repair
rmn03420  Nucleotide excision repair
rmn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rmn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TK49_14605
   03410 Base excision repair
    TK49_14605
   03420 Nucleotide excision repair
    TK49_14605
   03440 Homologous recombination
    TK49_14605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rmn03032]
    TK49_14605
   03400 DNA repair and recombination proteins [BR:rmn03400]
    TK49_14605
Enzymes [BR:rmn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     TK49_14605
DNA replication proteins [BR:rmn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     TK49_14605
DNA repair and recombination proteins [BR:rmn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     TK49_14605
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     TK49_14605
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_2 HHH_5
Other DBs
NCBI-ProteinID: AJW46355
UniProt: A0AAJ4ZKA0
LinkDB
Position
1:complement(3093157..3095964)
AA seq 935 aa
MSESQETLLLVDGSSYLYRAYHALPDLRNGEGFPTGAIYGIVNMLRKLRSDYPAKYSACV
FDAKGKTFRDDLYPAYKEHRAPMPDDLRAQIEPIHEAVRALGWPILVVDGVEADDVIGTL
AKRAAREGVRTIVSTGDKDLAQLVNDHVTLVNTMTNETLDPPGVLAKFGVPPERIVDYLS
LIGDTVDNVPGVPKVGPKTAVKWLTEFGSLDNIIARAGEIKGVVGDNLRNTLEWLPKGRE
LLTVKVDCDLSKEVPTFDALIDGGEDKAQLVDFFSRYGFKTWLREASGEALPDTRSVGAA
RKAATPVKNYAGEATQPQANLFDVEAPPDEVRYETVTTEAQLESWMRRLDEVDLVCIDTE
TTSIDPMLAQLVGISLSVKPGEACYIPVAHRGPDVAGLDGAAQLSRDAVLARMKLWLEDE
SRKKVGQHLKYDAHVFANHGIALRGILHDTMLESYVLESHRNHGMDALAERVLHLKTITY
EAVCGKGASQIGFDEVPLDRATEYAAEDADITLRLHRTLFPKVADDEKLRYVYEEIEMPT
SIVLQKMERNGVLVDGERLARQSAELGQRLLELEEQAFALAGQPFNLNSPKQIGEIFFNQ
LKLPIIKKTASGAPSTDEEVLQKLAEDYPLPKLLLDFRGLAKLKSTYTDKLPKMVNPRTG
RVHTTYGQATAVTGRLASTEPNLQNIPVRTEEGRRIREAFIAPEGSVIVSADYSQIELRI
MAHLSQDEGLLRAFREGQDVHRATAAEVFNVTPLEVTPDQRRVAKVINFGLIYGMSAFGL
ASNLGIGRDAAKLYIDRYFARYPGAARYMDETRQTARERGYVETVFGRRLWLPDINGGNG
PRRQAAERAAINAPMQGTAADLIKLSMLAVQGWLERDAMRSRLVMQVHDELVLEVPQDEL
AVVRERLPELMCGVATLRVPLVAEVGAGANWEEAH
NT seq 2808 nt   +upstreamnt  +downstreamnt
atgtcggaaagtcaagaaacgctgttgctcgtcgatggctcgagttatctgtaccgtgct
tatcacgcactgcccgacttgcgaaatggagaagggtttcctacgggcgccatctacggc
atcgtgaacatgctgcgcaaactgcgcagcgactacccggccaagtatagcgcttgcgtt
ttcgacgccaaaggcaagaccttccgcgacgacctttatccggcctacaaggagcaccgc
gcgcccatgcccgatgacctgcgcgcgcagatcgaaccgatccacgaagccgtgcgggca
ctgggctggcccatcttggtggtcgatggcgtcgaggccgacgacgtgattggcacgctg
gccaaacgtgccgccagggaaggcgttcgcaccatcgtctcaacgggtgacaaggacctc
gcccaactggtgaatgaccacgtcacgctggtcaacaccatgaccaacgaaacgctcgac
ccgcccggtgtgctggcgaagttcggtgtgccgcccgagcgcatcgtcgactatctctcg
ctcatcggcgacacggtcgacaacgtgccgggcgtgccgaaagtcggcccgaagaccgcg
gtcaaatggctgaccgaattcggctcgctcgacaacatcatcgcgcgggcgggcgagatc
aagggcgtggtgggcgacaacctgcgcaacacgctcgagtggctgcccaagggccgcgaa
ttgctgacggtcaaggtcgactgcgacctctcgaaggaagtgccgacgttcgacgcactc
atcgacggcggcgaagacaaggcccagctcgtcgatttcttcagccgctacggcttcaag
acgtggctgcgcgaggcctcgggtgaagcgctgccggatacgcgcagcgtcggtgctgca
cgcaaggcggcaacgccagtgaagaactacgccggcgaggccacgcagccgcaggccaac
ctgttcgacgtggaagcgccgccggatgaagtccggtacgagaccgtgactaccgaggcg
cagctcgaatcgtggatgcggcggctcgatgaagtggacctcgtctgcatcgataccgag
acgacctcgatcgaccccatgctcgcgcagctggtgggcatttcgctctcggtcaagccg
ggcgaggcatgctacatcccggtcgcgcatcgggggcccgatgtggcggggctcgacggc
gcggcgcaactctcgcgcgacgccgtgctcgcacgcatgaagctgtggctcgaagacgaa
tcgcgcaagaaggtcggtcagcatctgaagtacgacgcgcacgtgtttgccaaccacggc
attgcgctgcgcggcatcctgcacgacaccatgctcgaatcgtacgtgctggaatcgcac
cgcaatcacggcatggacgcgctggccgaacgcgtgctgcacctgaagaccatcacgtac
gaagccgtgtgcggcaagggcgcatcgcagatcggcttcgatgaggtgccgctcgatcgc
gcgaccgaatacgcggccgaagatgccgacatcacgctgcggctgcatcgcacgctgttc
cccaaggtggcagatgacgagaagctgcgctacgtctacgaagagatcgagatgccgacc
tccatcgtgctgcagaagatggagcgcaacggcgtgctggtcgacggcgagcgcctggcc
cggcagagtgccgagcttggccagcgcctgctggagctcgaagagcaggcgtttgcgctg
gcggggcagccgttcaacctgaattctcccaagcagatcggcgagatcttcttcaaccag
ctgaagctgcccatcatcaagaagaccgccagcggcgcgccctccaccgatgaagaggtg
ctgcagaagctcgccgaggattacccgctgccgaagctgctgctcgatttccgggggctc
gccaagctcaagtcgacctacaccgacaagctgccgaagatggtcaatccgcgcactggc
cgggtccacaccacctacggtcaggcgacggcggtcacggggcgtcttgcctccaccgag
ccgaacctgcagaacattccggtgcgcaccgaagaagggcggcgcatccgcgaggccttc
atcgcgccggagggcagcgtgatcgtttcggccgactactcgcagatcgagcttcgcatc
atggcgcatctgtcgcaggacgaaggcctgttgcgcgccttccgtgagggtcaggacgtg
caccgcgcgaccgccgccgaggtgttcaacgtcacgccgctggaggtgacgcccgaccag
cgccgcgtagccaaggtcatcaacttcggcctcatctacggcatgagcgcgttcgggctg
gcgagcaaccttggcattggccgcgacgccgccaagctctatatcgaccgttatttcgcc
cgctatcccggcgccgcgcgctacatggacgaaacgcgccagaccgcgcgggagcgcggc
tatgtggaaaccgtcttcgggcggcgactctggctgcccgacatcaacggcggcaacggc
ccgcgccgccaggcggccgagcgcgccgccatcaacgcgccgatgcagggcacggccgct
gacctcatcaagctgtcgatgctcgccgtgcagggatggctcgagcgcgatgcgatgcgc
tcgcgcctcgtcatgcaggtgcacgatgaactggtcctggaggtcccgcaggatgagctg
gccgtcgtgcgcgagcggttgccggaactgatgtgtggcgtcgcaacactgcgcgtgccg
ctggtggccgaagtcggtgccggcgccaactgggaagaagcgcactga

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