Ralstonia mannitolilytica: TK49_14630
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Entry
TK49_14630 CDS
T03778
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rmn
Ralstonia mannitolilytica
Pathway
rmn03420
Nucleotide excision repair
rmn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TK49_14630
03430 Mismatch repair
TK49_14630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmn03400
]
TK49_14630
Enzymes [BR:
rmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TK49_14630
DNA repair and recombination proteins [BR:
rmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TK49_14630
MMR (mismatch excision repair)
Other MMR factors
TK49_14630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AJW45821
UniProt:
A0AAJ4ZJY8
LinkDB
All DBs
Position
1:complement(3099353..3101716)
Genome browser
AA seq
787 aa
AA seq
DB search
MSDLLANLNPEQRAAVTLPDESALILAGAGSGKTRVLTTRIAWLIQSARVSPSGVLAVTF
TNKAAKEMTARLQAMLPINTRGMWIGTFHGLCNRLLRAHYRDAGLPQTFQILDTQDQLSA
VKRLLKSLNIDDEKFPPKNVQYFINGAKEQGLRAGDLEIANEFDRRMADLYAAYDAQCQR
EGVVDFAELLLRCYELLRYNDAIRAHYQRRFKHILVDEFQDTNKLQYAWLKLLAGLGEPG
VTPNAIFAVGDDDQSIYAFRGANVGNMVDFEREFRVQHRIKLEQNYRSHGNILDTANHLI
AHNSRRLGKNLRTDAGHGEPVRVYQAATDGQEAGWIVDEIRDRIASGMARSEIAILYRSN
AQSRVIEHALFSAGIPYKVYGGLRFFERAEIKHALAYLQLLENPDNDAAFGRVVNFPARG
IGARSLEQLQDAARLYGISLAASVPYLTGAAGTKLAAFVRLIEQMRADTRQMTLPEVVQH
VIHASGLIPHYQGEKEGLDRIENLQELVTAARAFVAEEGYGVDAIATALPVRHDAMLRIE
GGESDTASELVTDEAPAEMTPLVAFLTHASLEAGDNQAQAGQDAVQLMTVHAAKGLEFHV
VFITGLEEGLFPHENSQMEMDGLEEERRLMYVAITRARERLYLSFAQSRVLHGQIRYHIR
SRFFDELPEETLKWLTPQHAGYQATRRVTAESAWGKDWFKRPERGDEEAYTGTRPTGGMD
TGKNYADAKRAEATGFRVGQSVFHNKFGEGVITTLEGEGAEARAHIKFNRHGVKVLALGI
AKLDPIN
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctgctcgccaacctgaaccccgaacaacgcgccgccgtcacacttcccgat
gagtcggcgctgatcctggcgggggcgggcagcggcaagacccgcgtgctgacgacccgc
atcgcgtggctgatccagagtgcgcgggtgtcgccgtcgggtgtgctggccgtcaccttt
accaacaaggctgccaaggaaatgacggcccgtcttcaggccatgctgccgatcaacacg
cgcggcatgtggatcggcacgtttcacggcctgtgcaaccggttgctgcgcgcccactac
cgtgatgccggtctgccgcagacgttccagatccttgacacgcaggaccagctttccgcc
gtcaagcgcctgctcaagtcgctcaatatcgacgacgagaaattcccgcccaagaacgtc
cagtacttcatcaacggggccaaggagcagggcttgcgtgcgggcgatctggaaatcgcc
aacgaattcgaccggcgcatggccgacctgtacgccgcctacgatgcgcaatgccagcgc
gaaggcgtggtcgattttgccgaactcctgctgcgctgctacgaactgctgcgctacaac
gacgccatccgcgcgcactaccagcgccgcttcaagcacatcctggtcgacgagttccag
gatacgaacaagctgcaatatgcctggttgaagctcctggccggcctgggcgagccgggc
gtcacgcccaacgccatcttcgccgtgggtgacgatgaccagagcatctacgcgtttcgc
ggtgccaatgtcgggaacatggtcgacttcgagcgcgaattccgtgtgcagcaccgcatc
aagctggagcagaactaccgctcgcacggcaacatcctcgatacggccaaccacctcatc
gcccacaactcgcgccgcctcggcaagaacctgcgcaccgacgccggccatggcgagccc
gtgcgcgtctaccaggccgccacggatggacaggaagccggctggatcgtcgatgagatc
cgcgaccgcatcgccagcggcatggcgcgttccgagatcgccatcctgtatcgcagcaat
gcgcaatcgcgcgtgatcgagcatgcgctgttctcggccggcatcccgtacaaggtgtac
ggcggtctgcgctttttcgagcgggccgagatcaagcacgcgctggcgtacctgcagttg
ctggaaaacccggacaacgacgcggcgttcggccgtgtagtgaattttccggcacgcggg
atcggggcgcggtcgctcgaacagcttcaggatgcagccaggctgtacggcatttcgctg
gcggcgtcggtgccgtacctgacgggtgcggcgggcaccaagctggccgcgttcgtgcgc
ctgatcgagcagatgcgcgccgatacgcggcagatgacgttgcccgaggtcgtccagcac
gtgatccacgcgagcggcctgatcccgcattaccagggcgagaaggaagggctggaccgc
atcgagaacctgcaggaactcgtcacggcggcccgggccttcgtggccgaggaaggctac
ggcgtggacgccatcgcgacggctttgccggtgcgccacgacgcgatgctgcgcatcgaa
ggcggagagagcgataccgcctcggagctcgtcaccgacgaagcgccggccgagatgacg
ccgctggtggcattcctcacgcacgcgtcgctcgaggccggcgacaaccaggcgcaggcc
ggccaggacgccgtgcaactcatgaccgtgcacgcggccaaggggctcgagttccacgtc
gtgttcatcaccgggctcgaagagggcttgttcccgcacgagaacagccagatggagatg
gacggcctggaagaagagcgccgcctgatgtacgtggcgattacgcgggcgcgcgaacgg
ctgtacctgtcgtttgcgcaaagccgcgtgctgcacggacagatccgctaccacatccgt
tcacgcttcttcgacgagttgcccgaggaaacgctgaaatggcttacgccgcagcatgcg
ggataccaggccacgcgccgcgtgacggccgaatcggcctggggcaaggactggttcaag
cgcccggaacgcggcgatgaagaggcttataccggcacgcgcccgaccggcggcatggac
accggcaagaactacgccgacgccaagcgtgcggaggccacgggcttccgcgtcggccag
tcagtgtttcacaacaagttcggggaaggcgtcatcacgacgctggaaggcgagggcgcc
gaggcgcgcgcccacatcaagttcaaccgccatggcgtgaaggtgctggcgctgggcatc
gccaagctggacccgatcaactga
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