Ralstonia mannitolilytica: TK49_19515
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Entry
TK49_19515 CDS
T03778
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
rmn
Ralstonia mannitolilytica
Brite
KEGG Orthology (KO) [BR:
rmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmn03400
]
TK49_19515
Enzymes [BR:
rmn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
TK49_19515
DNA repair and recombination proteins [BR:
rmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
TK49_19515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Phe_tRNA-synt_N
Defensin_5
Motif
Other DBs
NCBI-ProteinID:
AJW46902
LinkDB
All DBs
Position
2:622992..624533
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AA seq
513 aa
AA seq
DB search
MNQRAKILRLVLGDQLNPLHSWFAEVDADVVYVLMEVRQETDYVLHHAQKILAIFAAMRD
FARGLRAAGHRVRYVAIDDESNRQSVTENLAALARHYGAERVEWQSPDEWRLDEQLRRWA
PAQSLSTCEVDSEHFLTGRHELAAMFDGRKQWLMERFYREMRRRFGVLLDGTGAPEGGQW
NFDHDNRKPWRGSPPEPADVRPVHDHRALWETIERSGVKSFGNPQAGALRWPLNRAEALA
CLDAFVGQVLPHFGDFEDAMSSSHQRLFHSLLSFSLNVKMLNPREVIDRAEAAYRHGKAP
LPAVEGFIRQILGWREYVRGIYWAHMPGYASSNVLNHNAPLPSWFWSGKTQMRCLQLAIG
QSLQTAHAHHIQRLMVIGNFALLAGLAPDEVHRWYLGVYIDAFEWVELPNTVGMSQWADG
GRIATKPYVSSAAYLSRMSDYCKGCHYDSKQRVGERACPYNALYWDFFARHSEVFGRNPR
LSMVYRQLAKMEPEERDVLRKRAEDVRARLEAL
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaacgcgcaaagattctccggctggtgctgggcgatcagctcaacccgctgcat
tcatggtttgcggaggtggacgcggacgtcgtctacgtgctgatggaagtgcgtcaggaa
acggactacgtcctgcaccacgcgcagaagatccttgccatctttgcggccatgcgcgac
tttgcgcgcggtctccgggcggccgggcaccgcgtgcggtatgtggcgatcgacgatgaa
agcaaccgccagtccgtgaccgagaatctcgccgcgctcgcccggcactacggcgccgag
cgggtcgaatggcaatcccctgacgagtggcgcctggatgaacagttgcgtcgttgggcg
ccagcgcagtcgctgtcgacgtgcgaggtcgattccgaacacttcctgacgggcaggcat
gaacttgccgcgatgtttgacggccgcaagcaatggctcatggagcggttctatcgcgag
atgcgccgccgctttggtgtgctgctcgacggcacgggggcgccggagggcggacagtgg
aatttcgatcatgacaaccgcaagccgtggcgcggctcgccgccggagcccgccgacgtg
cgtcctgtgcatgatcaccgtgcgttgtgggagaccattgaacgcagcggtgtgaagtcg
ttcggcaacccgcaggccggggcattgcggtggcctttgaaccgcgctgaagcgctggcc
tgcctggacgcgtttgtcgggcaggtgctgccgcactttggcgattttgaagacgccatg
agcagcagccaccagcggttgttccactcgttgctgtctttttcgctcaacgtgaagatg
ctgaatccgcgcgaggtgatcgatcgcgccgaggcagcgtatcggcatggcaaggcacca
ttgcctgccgtggaggggtttatccgccagatcctgggctggcgcgaatatgtacgcggc
atctactgggcgcacatgcccgggtacgcttcgagcaacgtgctgaaccacaatgcgccg
ctgccgtcctggttctggagcggaaagacgcagatgcgctgcctgcaactcgccatcggc
cagtcgttgcaaaccgctcatgcccatcacattcagcgcctcatggtgatcggcaacttc
gccttgctggcggggctcgcgccggacgaggtgcaccgctggtacctcggcgtgtacatc
gacgcattcgaatgggtggagctgccgaatacggtgggcatgagccaatgggcagacggc
ggccgcattgccaccaagccgtatgtcagtagcgccgcttatctttcccgcatgagcgat
tactgcaagggctgccattacgacagcaagcagcgcgtcggtgagcgcgcatgtccttac
aacgcgctgtactgggatttctttgcgcgccacagtgaagtgttcggccgtaacccgcgg
ctgtcgatggtctatcgacaactcgccaagatggaacccgaagagcgcgacgtcctgcgc
aagcgcgccgaagacgtgcgcgcaaggctggaggcgttatga
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