Rickettsia montanensis: MCI_00410
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Entry
MCI_00410 CDS
T01784
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rmo
Rickettsia montanensis
Pathway
rmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCI_00410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmo03019
]
MCI_00410
03016 Transfer RNA biogenesis [BR:
rmo03016
]
MCI_00410
Enzymes [BR:
rmo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MCI_00410
Messenger RNA biogenesis [BR:
rmo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MCI_00410
Transfer RNA biogenesis [BR:
rmo03016
]
Prokaryotic type
tRNA degradation factors
MCI_00410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
S1_RRP5
KH-I_KHDC4-BBP
KH_2
KH_DUF2096_C
Motif
Other DBs
NCBI-ProteinID:
AFC73054
UniProt:
H8KAB3
LinkDB
All DBs
Position
complement(74651..76897)
Genome browser
AA seq
748 aa
AA seq
DB search
MFNEITKSVTWNGKVLELSTGKIARQADGAVTVKMGNSVLLCTAVVANKAKEGIGFFPLT
INYREMAYAAGKIPGGFFKLEGKASDREVLVSRLIDRPIRPLFHPAFVNETHVTCSVLSY
DPETPVDILAIIGASAALSLSPAPYLEIVAASKVGLINGEFVLNPTLELLKTSQLDLVVA
GTSDSVMMVESEAHVLSEEQMLEAVKLGFESFQPVIKIIKELAEEAKKPKLEMQDLYPAS
LKKEIEKLFVKEIEQAFAIKSKQERSTNLDLIPEKVLTRFVSDIENKKYSNYQIESALKA
IESDILRNEILEKNRRIDGRSTTDIRQIACEIGLLPSAHGSALFTRGETQSLVSTTFGTS
LDEQIVDSLEGEYKERFMLHYIFPPYSVNEAMPMKAPSRREVGHGKLAWRAINPILPNKV
QFPYSIRVVAETTESNGSSSMATVCGSSLALMYAGVPIKAPVAGIAMGLVKEGKKFAVLS
DILGDEDYFGDMDFKVAGTSEGITALQMDIKISGVDFKIMKVALEQARLGRLHILEQMNK
VISKPNNELSKNAPSITTIKIDKDKIRDIIGPGGKVIKEICETSSAKIDISDDGTVSVYA
SDRDKLKVALDKIKAIAVEPEIGEIFNGTVMKVLDSGAFINYLGNKDGFVHISEVSEERI
ETVSSVLKQGDIVKVKLIGFDNKGKAKLTIKNADKDKSSNNTKPKTNVNNAKDNSEPEQR
RDSSKKRAWNEDNNVETVEVITERKYFN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgaaataactaagagtgttacatggaacgggaaagttcttgagcttagtaca
ggtaaaatagcaaggcaagctgacggggcagttacggtaaaaatgggtaattccgtttta
ttatgtacggcagtagtagctaacaaagcaaaagagggtataggtttttttcctttaaca
attaattatagagaaatggcatatgctgccggtaagataccagggggattttttaaactt
gagggaaaagcatcagatagagaagttttagtatctcgtttaatagatagaccgattaga
ccattatttcatccggcttttgtgaatgaaacgcatgtaacttgcagtgtgctttcatat
gatcctgaaactccggtagatatacttgcaattatcggtgcatcggctgcacttagccta
tcccctgctccttatctagaaatagttgcggcaagtaaagtgggtttaatcaatggtgaa
tttgttttaaatccgacacttgaattattgaaaacaagtcagcttgatttagtagttgca
ggaacatcagattcagtaatgatggttgaatcggaagctcatgtactctctgaagaacaa
atgttagaagccgtaaaattgggatttgaaagctttcagccggtaataaagataattaaa
gaactagcagaagaagctaaaaaaccaaaacttgaaatgcaagatttatatcctgcttca
ttaaagaaagaaattgagaagttatttgtaaaagaaattgaacaagcttttgcaattaaa
tctaaacaagaacgtagcactaatttagatttaatacctgaaaaagttcttacacgtttt
gtaagcgacatagaaaataaaaaatatagtaattatcaaatcgaatcagctttaaaagct
attgaatcagatatattacgtaacgagattttagaaaaaaatagacgtatcgatggaaga
agtaccacggatataagacaaattgcttgtgaaataggtttactaccttccgcacatggt
tcagctttatttactagaggtgaaacgcaaagcttagttagtactacattcggtactagt
ttagatgagcagatagttgacagtttagagggtgagtataaagagcgttttatgctccat
tatatctttccgccctactctgtaaatgaagcaatgccgatgaaagcacctagtcgtcgt
gaagtcggacacggtaaactcgcatggcgtgctattaatccaatattacctaataaagta
caatttccttattctattagagtagttgccgaaactacggagtctaacggttcttcttca
atggcaactgtttgcggtagttctcttgctttaatgtatgccggcgtaccgataaaagca
ccggttgcgggtattgctatgggacttgttaaggaaggcaaaaaatttgccgtattatcg
gatattctcggcgatgaagattatttcggtgatatggactttaaggttgcaggaactagc
gaagggattactgcattacaaatggatatcaaaatatccggagtagattttaaaataatg
aaagtagctttagagcaagcacgactcggtcgtttgcatatactggagcaaatgaataaa
gtcatcagtaaaccaaataacgaactaagtaaaaatgctccttctattactactataaaa
atagataaggataaaattagagatattataggaccgggcggtaaagtaataaaggaaatt
tgtgaaactagcagtgctaaaatagatataagcgatgacggtacggtgtctgtttatgct
tcagatagagataagctaaaagttgccttagataaaattaaagctattgccgttgaacct
gaaatcggtgaaatatttaacggtacggtaatgaaagtcttagattccggtgcttttatt
aattatttaggtaataaagacggctttgttcatattagtgaagtttcagaagaaagaata
gaaacggttagcagtgttttaaaacaaggcgatatagtaaaagttaagctaataggcttt
gataataaaggcaaagcaaaattaactattaaaaatgccgataaagataaatcttcaaat
aatacaaagccaaaaactaatgttaataatgctaaggacaattcagaacctgagcagcgg
cgtgattctagtaaaaaacgagcttggaatgaagataataatgttgaaactgttgaagta
attacagaacgtaagtattttaattga
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