Rickettsia montanensis: MCI_03915
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Entry
MCI_03915 CDS
T01784
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
rmo
Rickettsia montanensis
Brite
KEGG Orthology (KO) [BR:
rmo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MCI_03915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmo03021
]
MCI_03915
Transcription machinery [BR:
rmo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MCI_03915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_ner
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Nrap_D6
Motif
Other DBs
NCBI-ProteinID:
AFC73631
UniProt:
H8KAW5
LinkDB
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Position
complement(684791..686695)
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AA seq
634 aa
AA seq
DB search
MSNSNIDNDLDKIDSLLKKAKSKKIPVTYDDINNALPLNKNPSIRQLEEAILKFSDAGVD
ILESNEDDEIKLDIGMDEEFKLSTNVDNEPEDEVEEENIGTTDDPVRLYLKDMGGVDLLT
RENEVEIAKRIEEGHKTMTASLCRSPIAMRCFIVWYEDLVNEKMLLRDLIDLEANMLHDE
TPENDEEHSSETEGEEHEDNHLSMSRVETQILPNIIERMKKISFICEELLIEAKKCYEKS
FEPKVLQNSKKYNNLELLINEVSEIHFNSKRTEEILGKMYGINRDLINKETAFLKLAEKY
GVTRQNFLDEYIGSVINAAWKEKMLKNKKVAWKELMTKESDYIDQMIAELSVIESKTGLL
VNDFKKLVNTIQKSERQTLQAKKDMIEANLRLVISIAKKYANRGLQFLDLIQEGNIGLMK
AVDKFEYRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKILRTSRQMFNEL
GYEPTATEIANRLSMPLDKVRKVMKIAKEPISLENPVGDDSDGGQLGDFIEDKNAVAPID
AAIQSNLREVTTRVLATLTPREERVLRMRFGIGMNTDHTLEEVGQQFKVTRERIRQIESK
ALRKLQHPIRSKKLNSFRSGGKRGDGNPSDLLEA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatagcaatatagacaatgatctagataaaatagatagtttacttaaaaaagct
aaatctaaaaagataccggtcacttatgatgatataaacaatgctcttcctcttaataaa
aatccttcaataagacaattagaggaagctatattaaaattttccgatgcgggagtagat
attttagaatctaatgaagatgatgaaattaagcttgatatcggaatggatgaagaattt
aagctatctaccaatgttgataatgaacctgaggatgaggtagaagaagaaaatataggt
actaccgatgatcctgtaagattatatcttaaggatatggggggagtcgatcttttaact
cgtgaaaatgaagtagaaatagcaaaaaggattgaggaaggacataaaacaatgactgct
tccttatgcagaagccctattgctatgcgttgttttatagtatggtatgaagatttagtt
aatgaaaaaatgttactacgtgatctgatagatttagaagctaacatgttacatgacgaa
acacccgaaaatgatgaagaacatagtagtgagaccgaaggagaagagcatgaggataat
cacttatctatgtctagagtagaaacgcagatattacctaatattatagagcgtatgaaa
aagatttcttttatctgcgaagagctactcattgaagctaaaaaatgttatgagaaatct
tttgagccgaaggttttacaaaatagcaaaaaatataataatttggaattattaataaat
gaggtttcggaaatacattttaattctaaaagaacggaagaaattttaggtaagatgtat
ggaataaatcgtgatttaattaataaagaaacagcttttttaaaacttgctgaaaaatat
ggagtaactcgccaaaatttccttgatgaatatataggatcggttatcaatgcagcatgg
aaagaaaaaatgctgaaaaataaaaaagtcgcttggaaagagttaatgactaaagaatcg
gattatatagatcaaatgattgctgaattatcggttatagaatctaaaaccggtctttta
gttaatgattttaaaaaactagtgaatactatacaaaaaagtgagagacaaacgctacaa
gcaaaaaaagatatgatagaagcgaatttacgtttagttatatctatcgctaaaaaatac
gctaatagaggattgcagtttttagatttaattcaagaaggtaatataggacttatgaaa
gcggtggataaatttgaatatcgccgtggttataaattctctacctatgctacgtggtgg
attagacaagctataacaagagctattgccgatcaagcaaggactatacgtattcctgtg
catatgattgaaacaattaataagatactacgtacttcaagacaaatgtttaatgaactc
ggatacgaaccaacagcaacggaaatcgctaaccgtctttcaatgccgcttgataaagtg
cgtaaagtcatgaaaatagctaaagaacctataagtcttgagaatcccgtaggtgatgat
agtgacggcggtcaattaggcgattttatcgaagataagaatgcagtagcaccgattgat
gcggcaattcagtcaaatttacgagaagttaccactagagtacttgcaacccttacgcct
cgtgaagaaagagtgcttagaatgcgtttcggtataggtatgaatactgaccatacatta
gaagaagtagggcagcaatttaaagtaactagagaacgtataagacaaatcgagtcaaaa
gctttaagaaagttacaacatcctattagatccaaaaaacttaatagctttagaagcgga
ggaaagcgtggtgacggtaatccatcggacttactagaagcatga
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