KEGG   Rhipicephalus microplus (southern cattle tick): 119159416
Entry
119159416         CDS       T07403                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
rmp  Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rmp00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    119159416
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rmp01009]
    119159416
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rmp03021]
    119159416
Protein phosphatases and associated proteins [BR:rmp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     119159416
Transcription machinery [BR:rmp03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     119159416
    Little elongation complex (LEC)
     119159416
SSDB
Motif
Pfam: ELL Occludin_ELL KATNA1_MIT CT398_CC Cep57_CLD
Other DBs
NCBI-GeneID: 119159416
NCBI-ProteinID: XP_037268065
LinkDB
Position
1:281664567..281700998
AA seq 525 aa
MAALVEGSQYGLSSQGNYSKNKTLIFVKLTDSALRSIEEYLKYKGGCTQKPSIQFEGNQG
VITVPRPSQGGQQQRFGFGVSTLEKDAPQGSFECVQQMGQRALESLGCLLHKMQIHASED
SYEKTRVKMAVVEQESKKNCTKVIKVTSPYVGRKVKVKRPQLSVPPRQSSSSPPRITFGK
PTGQNHNSVSTNESRSGIVRRSYRERVIHLLALRPYKKPELLARLMKEGIKEQDRKGLSA
VLSQVAVLKDNSYCLARHAWNQVCDDWPYYTPEEQELVKRMRPHNLTPPSENGHHSPPAH
NPTSRTSPSVQKREPCPEPPSSVPGSKRQRISLCTNGAATRPPHSRVLAESTSGNQPCRV
QPPNPEPVTNVPFACHSSPGSSPDSRDSGDLHGTGVSSTTPSPRNSTNQVLEYVTKYTEI
ISKEQRDRYKADFNAEYEEYKALHSTIESVSKRFSDLEDCLRTAREGTEQWNRVKQQIVK
EYEESKRDQRYQQARRKFQYLHDKLAHIKRMVMDYDSRSHNLFKS
NT seq 1578 nt   +upstreamnt  +downstreamnt
atggcggcactggtagaggggagccaatatggtctgtcttcacaggggaattactcgaaa
aataaaacgcttatatttgtgaaactcacagattcggcgctgagatccattgaggaatat
ttaaagtacaagggcgggtgcacgcagaagccctcgatacagtttgaagggaaccaaggg
gtgataacggttcctcgcccatcacaagggggccagcagcagcgctttggctttggtgtt
tcgacgctagagaaggatgcaccacaaggcagctttgagtgcgtccagcagatgggccag
agggccctcgagtcccttggttgcctgctgcacaaaatgcagatccatgccagtgaagac
agctatgagaagacgcgcgtcaaaatggctgttgtggagcaagagagcaagaagaactgc
accaaggtgattaaagtgacatctccgtatgtaggacgcaaagtgaaagtgaagcggcca
cagctttcagtgccgcctcgccaatcctcttcatcccctccacgaataacatttgggaag
cccacaggccaaaaccacaactcagtgtccaccaatgaaagccgttcaggaatcgtacgg
cggtcgtacagggagagggtcattcatctgcttgccttgcggccatacaagaaaccggag
ctattagcacgacttatgaaagagggcattaaggagcaggaccgcaaggggctttcagca
gtgctaagccaagttgcagtgctcaaggacaattcgtactgcttagcgaggcatgcttgg
aaccaagtttgtgacgactggccctactacacgcccgaggagcaggaattggtcaagaga
atgcggccacacaacctgacccctccgagtgaaaatggtcatcactctcctccagctcac
aaccctacgtcacgcacgtcgcccagtgtacagaaacgggagccatgtccagagccccca
tcgtctgtccccggcagcaagcgccagaggatcagcctctgtaccaacggtgctgcgact
cggccaccacactcgagagttcttgcagagtccacatcaggcaatcagccgtgtcgtgta
cagccgcccaatcctgagcctgtcacaaacgtgcccttcgcctgccattccagccctggg
tcatcaccagactctagggactcaggagacttgcatggcactggtgtttcatcaactacc
ccatctccacgaaactccacaaaccaagttctagagtatgtcaccaagtacactgaaatc
ataagcaaggagcagcgagatcgatacaaggctgacttcaatgccgagtatgaggagtac
aaagccctccattccacaatagaatctgtgtcgaagagattctccgacctggaagactgc
ctacgcactgcccgagaaggaacggaacagtggaatcgtgtgaagcagcaaatcgtgaag
gaatacgaggaaagcaagcgtgaccaacggtatcagcaggctcggcgaaagtttcagtac
ctgcacgacaagctcgcacacatcaaacgcatggtgatggactatgactcgcgctcccac
aacctcttcaagtcctaa

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