Rhipicephalus microplus (southern cattle tick): 119159492
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Entry
119159492 CDS
T07403
Name
(RefSeq) nuclear cap-binding protein subunit 1-like isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03013
Nucleocytoplasmic transport
rmp03015
mRNA surveillance pathway
rmp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119159492
09122 Translation
03013 Nucleocytoplasmic transport
119159492
03015 mRNA surveillance pathway
119159492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119159492
03041 Spliceosome [BR:
rmp03041
]
119159492
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
119159492
Spliceosome [BR:
rmp03041
]
Common components
Common spliceosomal components
Cap binding complex
119159492
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
119159492
NCBI-ProteinID:
XP_037268162
LinkDB
All DBs
Position
1:292273895..292332312
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AA seq
782 aa
AA seq
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MSRRRAYEDDDEDDFRVRKRRRVSSEPREIEDRLKSLIERVGEKSTSSLESNLEGLASVL
DADLPSYKGNILNILVECAIFMPEKTTIYTTLIGLLNARNYNFGGELVELLVKNYKERLR
DCKFEDARIIVRVFADLVNCHVISVGSVVSLFESMLEVTLEENIPQVRSDWYVYAVLTAL
PWVGRELYEKKDQELDRLMRHIDDYISKRQKRHAPALRVWQAEVPHAQEEGLDCLWAQVS
KLRSEKWVERQLVRPYLAFDGVLCEALQHNLPSLPPPPHQPHYVYPFPMVVFRLFDYTDC
PEGPVLPGSHSIERFLGEEQLLHILERNYADRKVCAAQLLSYQGKLKVPLEYMIIEVIFG
ELLRLPTSRHLEICYGSLLLELCKLQPSSLPQVLAQAVELLYEQLDTMNTDCLDRFCSWF
AYHLSNFQFRWTWDDWAEAVSLDPLHPKAVFLQQALHRCLRLSYHQRVVELVPASFAPFL
PAKPVPDYRFEKEGADGLPGAPVAARLSSCIRSKCTPEEALEVLAELPNPLQEDEGMEPA
YNPLKIQIFVETLLYIASKSFSHSFAGIAKFHYVFKTLASTEEAQICVLRSTYDLWHNHQ
QMMIGLVDKYLKTQIVECSAVANWVFSKDLAPDFMRPYVWEILHLTIRKMIKHVRKLELE
LEEAKNKLSKVDPDDKDHPTEEMIERMEEKLEATQSDLKNLFLIIFQRFIMTLTEHIGQC
EVEGTNFQTYWFRWTLGRLQEVFFQHHEHVFKYVTTLESLLFTSDIDPHVLEVFQQFAAL
RA
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgagccgaagaagagcgtacgaggacgacgacgaagatgatttccgcgttcgcaagcgc
cggagggtcagttcggaacccagagaaatagaggaccggttgaagtctttgattgaaaga
gtcggtgaaaagagcacgtcatcgcttgaaagcaacctggaaggattggccagtgtgttg
gatgcagacctcccaagctacaaaggaaacatattaaatatattggtagaatgtgccatt
ttcatgccagagaagacaaccatctacacaacgctcattggcctgctcaatgcacgtaat
tataacttcggtggtgagcttgtggagctcttggtgaaaaattacaaggagcggctcaga
gattgcaagtttgaagatgcaaggatcattgtgcgagtctttgcggacctcgtcaactgc
cacgtcatttctgttggctcggtggtcagtctcttcgaaagcatgctcgaggtcaccctt
gaggaaaacataccacaggttcgctctgactggtatgtttatgctgtcctgactgcattg
ccatgggtggggcgagagctctatgaaaaaaaggaccaagaattggacaggctgatgcgc
catattgacgactacatcagcaagcggcagaagaggcatgccccagctttgcgtgtctgg
caagcagaagttcctcatgcccaggaggaggggctagactgcctctgggcgcaagtgtca
aagctgcgctctgagaaatgggtagagcggcagctggtgcgtccctacctggcatttgac
ggtgtcctgtgtgaggctctgcaacacaatctgccgagcctgcccccaccgccacaccaa
ccacattacgtctaccccttccccatggtggtgtttcggctcttcgactacactgactgt
cccgagggtcccgtgctgccgggctcccattcaattgagcgtttcctgggagaagagcag
ctgcttcacatcctggaacgcaactacgcagatcgtaaagtctgtgctgcacagctactg
agctaccaaggcaagcttaaggtgcctctagagtacatgatcattgaggtgatctttggt
gagttactgcggctacccacctctaggcacttggagatttgctacggttcacttctgttg
gagctgtgcaagcttcagccaagcagcttgccccaagttcttgcccaagctgtcgagctt
ctgtacgagcaattggacaccatgaacaccgactgtttagacaggttctgcagctggttt
gcctatcacctgagcaatttccagtttcggtggacatgggacgactgggccgaagccgtc
tccctggatcctctccatcccaaagctgttttcttgcagcaagcattacatcgatgtctc
aggttgtcctatcaccagcgagtggtggaacttgttccagcctcatttgcccccttcttg
cctgcaaaaccggtccctgactaccgtttcgagaaggaaggagcagacggcctgcctggt
gcacctgttgcagctcggctgagcagctgcatccgtagcaagtgcacacccgaggaagcc
ctcgaggttctggccgagttacccaacccgctgcaggaggacgaaggcatggagcctgca
tacaaccccctaaagatacaaatatttgtggagaccttgttatacatcgcaagcaaatcc
ttctcgcactcgtttgcaggcattgccaaatttcattatgtgttcaagacattggcatct
acagaggaggctcaaatatgtgttttgcgtagtacatatgacctctggcacaaccaccag
cagatgatgattggccttgtagacaagtacttgaagacacaaattgttgaatgttctgcc
gtggctaattgggtcttctccaaagatctcgcacccgacttcatgaggccttatgtttgg
gagatcctacatctcactatacgaaaaatgatcaagcacgtcaggaagttggagctggaa
ctggaggaagcaaaaaacaagctcagcaaggttgacccagatgacaaagaccatcctaca
gaggagatgattgagcggatggaggagaagctggaagccactcaaagtgacctcaagaac
ctctttctcatcatatttcaaaggttcatcatgacattgaccgagcacatcggccagtgt
gaggtggaaggcacaaacttccagacctactggtttcggtggacactgggtcgcttgcaa
gaagtattttttcagcaccatgaacatgtgttcaagtatgtgaccacactggaatcactt
ttgttcaccagcgacatcgaccctcatgtgctggaagtgttccagcagtttgcagcatta
cgtgcataa
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