Rhipicephalus microplus (southern cattle tick): 119159494
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Entry
119159494 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC119159494
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119159494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmp03041
]
119159494
Enzymes [BR:
rmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119159494
Spliceosome [BR:
rmp03041
]
Complex C
Other components
Step II factors
119159494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NYN
IBR
IBR_1
KH_DEAH11
SIS_2
PIN7
Motif
Other DBs
NCBI-GeneID:
119159494
NCBI-ProteinID:
XP_037268169
LinkDB
All DBs
Position
1:complement(115387430..115454970)
Genome browser
AA seq
2090 aa
AA seq
DB search
MVREPPKNAPELSESALRPLLDVMSWRSADRPKDYYQERRRNGAGREDFEEPCYCGPPSS
HGYNYDRGRQYDASRGGRHGVYPADVHQRYGYSGRGGYHRQQYENAPPHDPYERNVRGHA
RHYRGRPPRGVVHPGVCTTSRGGWSRCSDALVHHRKGNAPLTAGESLLNFKRTVNRMNSD
YDRSVLSESCAYSVSETGDARSQYNEDNYAAHWHGDGAGGTTSSPSRDDSIDCKEAVRRG
GPLPRDVGFRRRGRPFVARGVSSLTSLISVLWDIENCAVPNGVPAYQIVLKVRQTFYVGY
REGDFVVACDTARMSPTVVAELNEAQVTVIHVPGGQKNAADDKLRTVLRRFSDAHKLTNS
RIVLISGDGDFAAEIHEMRYTNLIEVVLIHNEQAKRALRDAATESISYREFLADLSNRKR
SAPKVVRTLQFDTRNEAKNKGTKQDLKKSVPAVVDYDKERQMRDELTNTEMRAEEQSALS
PSYRTKVGLLVAREPMNAEFWKRYLSRLNIPKDFTLEVGHGGKDVVFLVYPSFNKAKKAV
EILNNQPVDDADMPACPSRATRVKSAVAAHKSKLEAVRNKIVCLDGQKRISALLKAAYED
QAAIYEAQLAQFLKTISDLPQSPQKADNATTTEIARLKRASVVYGVKSKILKTLSERQVL
FVTSSPGSRTALEVASYAQDLDLRVISVQFSDLSAEQCSKNAVSMSGLGPVQCWLNPKQP
IKSECTVVVTSARHFFQEFVRREVDFSDFKVIIVDELEKESAYQRVALAIIRKHFVSRVS
VILCGNESDACTQIQEELFLKSQDVVRGALTFPVEIINKEKPANRVMACISTALEFCQTS
EVFVGGDVLVFLPSLADAILADGILRHKIREEDIGVPITHEVLSTSSPASPQSPRKGCWR
VIFTAECPDAVLSTLQVRCVVDSGLTLRTIYQNGTFVMQLACVTKVEAEKRRTLAGQHES
GTCYRLYDKPAQSYSLQADLYDSKYLEDIVLRLSTQKTSSDTFILDELFSKSLLEQVKSA
LKQIEAFDSQEQMTDLGARLCQISLPPRVGMLVLRSIGKAPSIDAVLLSLLVFEDMLLAY
RPLKEDGSQHDFPVSEGASVFSGVIQRYKDWLVVPKKMKRSWCDVNGVNEAFMTYLHNAV
QRVQQEFTEFQGRNLGADCAKEEKTATITLSELLAQSFPEGVLEACEHGYKHPIFGDELQ
VSPLSLFDTEATKPQKVVCCLFAQVCGEKNVKLLNFAALPESFCKRERDSQTSLDDPTLP
EIVEMFGPVGKLIWNHQFNSKHSLQAIEEKLRARSDGAKGYLELDTAGQCITIRGHEKYC
SEAQECLQNIVKXQVTKLSRKDKEAFLTPRKSPYSDHPVLAVIGVGGLVNEVLSPATFRT
IVAYDVRMPHASFRKRVNDLGEIVQYWYMNQEATFEITYKTAKEANHAYRALSEQGSDLK
VYVKGESLDYREEQRARRPAFHVQISLPRRLCTGTAFVHLPDQASFNRVAGRLPLAVPLD
NTTVTIHRDKKVPCQLYITGLPPTVSQSTLSGLIRESLSADVKSVGLVRQAAYNTAPENL
RTLGDAVQEVFDEELGECCPKLVLNVPRPEDYVEKGWMSFEDPVRAQGACTLLKGSTVTV
NHSGDGRSATLPMAIHILMEDTLCFPRSFFEAIQGRIEDEFRRQEGLRQEDNFKCDATPC
GDAVHVKLKANNLSDFHKAVHLFNKLLLGPDVPRVDGRVCPERITEVLKAVAPGGGIFVY
RKSGESRLVGDAQLIQSASDMLKRHTNAWEKRQKKKLPLVGEEFTLLRSYINTLGDDPWY
LAKERKLDAATFDWQFEAIEILGTEAAVREAEQLVNQLRKVRLDARLTNDAEGRCPICRE
PPSTAQEDGASTSGHRLELCGHWHCGACLLLALKRAPLPLACFEKGCASPWAIADITHVT
GNNHELLSDLARRSFEGSVAADSEGRWLPCPTPECPFALGSKRDAEAQGVHVIGDVHVCP
GCTNAVCFRCQSLYHYGISCTTFKDFMCPNGANDKSWLSKDPGMRALCPSCKVRLERNAN
KKVGACWSCRRLFCWRCHRSFEDDAAAARGHRKQYCQLALPLGSDTCCIM
NT seq
6273 nt
NT seq
+upstream
nt +downstream
nt
atggtgagggagcctcccaagaatgctccagaattgtcagaatcagccctgcggccgctg
ctagatgtcatgagctggcgcagtgccgacaggccaaaagactactaccaggaacgtcgt
cgaaacggggccggccgggaagacttcgaagagccctgctattgcggaccaccgtcatct
cacggctataactacgaccgtgggcgtcaatacgatgccagcagaggaggccgacacggc
gtttacccggctgatgtgcatcaacgttacggctacagtgggaggggcggctaccaccga
cagcaatacgagaacgctccgccccacgatccctacgaacgcaatgtgcgaggtcatgca
cggcactaccgtggccggcctcctcgaggcgttgtacatccgggagtatgtacaacgtct
cgagggggatggagccgctgttcagatgccctggttcatcatcgaaaaggcaacgcccct
ttgaccgccggcgaaagcctactgaacttcaagcgaaccgtgaatcgtatgaacagtgat
tacgaccggtcggtgctctccgagagttgtgcgtacagcgtgtccgagaccggcgatgcg
aggagtcagtacaatgaagacaactacgctgcccactggcacggtgacggcgcaggcggt
accacgtcgtcgccgtcgcgcgatgactccattgactgcaaagaagccgtcaggcgtggt
ggtcctttgccgagggacgttggcttccggcggcgtggtcgtccgttcgtcgcccgcggc
gtctcgtcattgaccagcttgatcagcgtcttgtgggacatcgagaactgcgccgttccc
aacggagttccagcgtaccaaattgtgctcaaggtgcgccagacgttttacgtgggttac
cgtgagggggacttcgtcgtcgcctgcgacaccgcgcgcatgagtcccaccgtggtcgcc
gagttgaacgaggcgcaggtgacggtcattcacgtgccgggcggccagaagaacgcagct
gatgacaagcttcgcacggtgctgcgccgtttctccgatgcgcacaagctgaccaactcg
cgcatcgtgctcatttccggcgacggggacttcgcggccgaaattcacgagatgcgctac
accaacctcattgaagttgtgctcattcacaatgaacaggcaaagagagctttgagggac
gcggcgaccgaaagcatcagctacagggagtttctggcggacctcagcaatcgcaagaga
agtgcaccaaaggttgtgagaacattgcagtttgacacgcgaaatgaagcaaaaaacaag
ggcacaaaacaagacctgaagaagagtgtcccagcagtcgttgactacgataaagaaagg
caaatgagggatgaattgacaaacacagagatgcgagctgaagaacaaagcgcactttcg
ccctcctaccgcaccaaagtcggattgctcgttgccagagagccgatgaacgctgaattc
tggaagcggtacttgtcgcgcttgaacataccaaaagactttacgctagaggtcggtcac
ggtggcaaagacgtggtttttctagtttatcccagcttcaacaaggcaaaaaaagcggtt
gaaatcctcaacaatcagcctgtcgatgatgcggacatgccagcatgcccaagccgagcg
accagggttaaatctgcagtagctgctcacaaatcaaagctcgaggctgtcagaaataag
atagtttgcctcgacggacaaaaacgaatctcggcactgttaaaggcggcgtacgaagat
caggccgccatttacgaggctcaattggcacagttcttgaagaccatttcagacttgccg
cagtcgccacagaaagctgacaatgccacaaccaccgaaatcgccaggctgaagagggct
tcggttgtttacggcgtcaagtcaaaaattctcaagaccttgtccgagcgccaagtgctg
ttcgtgacatcgtcaccaggatcccgaaccgcgctcgaagtggcgtcgtatgcgcaagac
ttggacctacgcgtcatcagtgtgcaattcagtgatctgtcagccgagcagtgctcgaag
aacgccgtgtccatgagcgggttaggccccgtgcagtgctggctgaatcccaaacagccg
atcaagtctgaatgtacagttgttgtgaccagcgcacggcacttttttcaggagtttgtg
cgccgtgaagtggacttctcagacttcaaggtcatcatcgtggatgagctggaaaaagag
agcgcttaccagcgtgttgctctggcaatcattcgcaagcattttgtgtctcgggtcagc
gtcatcctgtgcggcaatgaatccgatgcttgtacacaaattcaagaagagctttttctg
aaaagccaggatgtcgtccggggcgccctcacgtttcctgtagaaatcataaataaagaa
aagcccgcaaacagggtgatggcatgtatctccactgctttagaattctgccagacatcc
gaagtgttcgtcggtggcgacgttctagtgtttcttccatctcttgcagacgctatcctc
gcagacggcatcttgcgtcataaaattagggaggaagacattggcgtgccaatcacgcat
gaagttttgtccacctcttcaccggcttcccctcaatcaccacggaaaggatgctggagg
gtaatcttcacggcagaatgtcccgacgctgtcttgagtacactgcaggtgcgttgcgtc
gttgacagtggactaacactgaggaccatttatcagaatggaacatttgttatgcaactc
gcttgcgtaacaaaagtcgaggctgaaaaaaggagaactttggcgggacaacatgaaagc
ggcacatgctaccgcctctacgacaaacctgcacaaagctattcactacaagccgaccta
tacgactcaaagtacttagaagacatcgttcttcgtctttctactcaaaagacaagctcc
gacacattcattctcgatgagctcttctcgaagtcactgctggaacaagtaaagtctgca
ttgaaacaaattgaggcgttcgacagtcaagaacaaatgactgatcttggtgctaggctg
tgtcaaattagccttccgcctcgggttggtatgcttgtgctccgctccattggcaaggct
ccatccatagacgctgtccttttatcactcctagttttcgaagacatgcttcttgcatat
agaccgctgaaagaagatggaagtcagcacgacttcccggtgtctgagggagccagcgtt
ttctctggggtgattcaaaggtacaaggactggctggttgtgcccaagaaaatgaagaga
tcttggtgcgatgtgaatggcgttaacgaagccttcatgacctaccttcacaatgcagtt
caaagggtgcagcaggaattcactgagttccagggcagaaatctgggcgccgattgtgca
aaggaagagaaaactgctacaatcacgttaagtgaactgctcgctcaatcgtttcccgaa
ggcgtgctcgaagcgtgtgagcatggttataaacaccctattttcggcgatgaattgcaa
gtgtcaccattgtcgctatttgacaccgaggcgacaaagccgcagaaggtcgtttgctgt
ctatttgctcaggtttgtggcgagaagaacgtgaaactgctcaactttgccgccttgccg
gaatcattttgtaagcgcgaaagggactcccaaacttcgcttgatgatccaacgcttcca
gaaattgtggaaatgttcgggcctgtgggtaagctcatctggaatcaccagttcaactca
aagcactcacttcaggccatcgaggagaagctgcgtgctaggtcagatggcgctaagggt
tacctcgaactggacacagccggacagtgcatcacaataagagggcacgagaagtactgc
tctgaagctcaagagtgtcttcagaacatcgtcaagtagcaggtaacaaagctgtctcga
aaggacaaggaggcctttctcacaccccgaaaatcaccctacagcgatcatcctgtgctc
gccgttattggcgtaggaggtctcgtcaacgaagttctctcaccagcgacctttcggact
atagttgcatatgacgtgaggatgccccatgcaagttttcgcaaaagggtcaatgatttg
ggagagatagtgcaatactggtacatgaaccaggaagctacgttcgagatcacttacaaa
acggcgaaagaagcaaaccacgcctaccgcgccctttctgaacaaggcagtgatttaaag
gtatatgtaaaaggagagtctcttgattaccgggaagagcaaagggcgcggagaccggcg
ttccacgtccagatctccctaccgcgtcgtctatgcacaggtactgcgttcgtccaccta
cccgaccaggcatcgttcaaccgcgtggcggggcggctgcctctggcagtccctttagac
aacaccacagttaccattcatcgtgacaagaaggtaccttgtcaattatacattacaggc
ttgcctccgacggtgagccaatcgacgctgtcgggtctcattcgtgagtcgctctcagcg
gacgtcaagagtgttggcctcgtccgccaagctgcatacaacactgctcccgagaatctg
cgaacattaggagatgctgtacaggaagtgtttgacgaagagctcggcgaatgctgtcca
aagcttgtcctcaacgtcccgaggcccgaagactatgtcgaaaagggctggatgtcgttc
gaagatcctgtacgggctcagggcgcttgcacgctgctcaaaggctcaaccgttactgtc
aaccacagcggagatggcaggagtgccacgttgccgatggcaatacatattcttatggaa
gatacgctctgcttcccacgctcattcttcgaggcaatacagggccgaatcgaagatgag
ttccgtcgtcaagaagggttgcgacaggaggataactttaaatgcgacgctacaccttgc
ggtgatgcggtacatgtcaagctaaaggccaacaacctaagcgactttcacaaggctgtt
catcttttcaacaaactgcttctcggccccgacgtccctcgcgtcgacggtcgcgtgtgc
cctgagcgaattacggaagtgctcaaggctgtggcacctggtggtggcatcttcgtgtac
cgcaagtccggcgaatctcggttggtcggtgacgcacagctcatccagtcagcaagcgac
atgctaaaaaggcacaccaacgcctgggaaaagcgacagaagaaaaagctaccactagta
ggcgaagagtttactctgttgaggtcatacataaacacgctgggtgacgacccttggtat
ctggccaaggaacgcaagctggacgccgctacctttgattggcaatttgaagcaatcgaa
attctcggcacggaggcagccgtaagagaggcggagcaacttgtaaatcagctgcgaaaa
gttcgactggacgcgagattgacgaacgatgccgaaggtcgctgtccgatttgccgagaa
ccaccaagcactgctcaagaggacggggcatcaacgtccgggcaccgccttgagctgtgc
ggccattggcactgcggggcgtgcctgcttctagccctaaagagagctcccctgccgctg
gcgtgttttgaaaagggctgcgcgtcaccgtgggcgatagccgacatcacccacgtgaca
ggcaacaaccatgaacttctgagcgaccttgcacgaaggtcctttgaggggagcgtcgca
gctgactcggaaggaagatggctgccctgtccgacacccgaatgcccctttgcactgggt
tccaaacgggacgcagaggcacagggcgtgcacgtaatcggagatgtgcacgtctgtccc
ggatgcacaaacgccgtctgcttccggtgccagtcactgtaccattacggaatctcgtgc
actacattcaaagacttcatgtgtccgaatggtgcaaacgacaagtcatggctcagcaaa
gatccgggaatgcgagccctctgcccctcatgcaaagtgcgactggaacggaacgccaac
aagaaagtgggcgcctgttggtcctgccgacgcctgttttgctggcgctgccaccgtagc
ttcgaggacgatgccgctgctgccaggggtcaccgcaaacagtattgtcagctggctctg
ccgctcggtagtgacacgtgttgcatcatgtga
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