Rhipicephalus microplus (southern cattle tick): 119159550
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Entry
119159550 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: CDK-activating kinase assembly factor MAT1-like
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03022
Basal transcription factors
rmp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119159550
09124 Replication and repair
03420 Nucleotide excision repair
119159550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmp03021
]
119159550
03400 DNA repair and recombination proteins [BR:
rmp03400
]
119159550
Transcription machinery [BR:
rmp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119159550
DNA repair and recombination proteins [BR:
rmp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119159550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-UDP
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-P11
zf-RING_6
zf-C3HC4_2
TRAF3_RING
zf-RING_4
DUF3818
Motif
Other DBs
NCBI-GeneID:
119159550
NCBI-ProteinID:
XP_037268249
LinkDB
All DBs
Position
1:299111318..299152336
Genome browser
AA seq
314 aa
AA seq
DB search
MDDLACPRCRTTKYRNPSLRLLVNVCGHALCENCVELLFVKGSGACPQCNVPLRRGNFRL
QIFEDSKVEXEVDIRRKILKDYNKREEDFETLRAYNDYLEEVETIIYNLANEIDVEATRR
KVEQYKRENKAQIQKGKLKASKDEEYLEELLEQERQETELRRDQLAEVEKAAQREKLKQK
ESLIDDLMFSDMPASKILASHGDKLKQVAGPKPLPPKPLSAEFSTGIKFRPKEAFLPVPK
IVEGPLYKYTAPTVDICGPTAPSLESLSPLGYTNHVRATVEAEEAGGFLAGLACQRALQD
AFCGLHFKVAEEVS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggatgatctggcatgtccacgatgccggacaacaaagtatcgcaacccttcactgcga
cttctggtcaatgtctgtggccatgcactctgtgagaactgtgttgagcttctctttgtt
aaaggttcgggggcctgtccgcaatgcaacgtgcctttgagaagaggcaattttcggctg
caaattttcgaagattctaaggtggagnaagaggtggacatacgacggaagatactcaag
gactacaacaagcgtgaggaggacttcgagacactgcgggcttacaacgactaccttgag
gaagttgaaaccataatttacaaccttgccaatgaaatcgatgtcgaggccacacgacgg
aaagttgagcaatacaaaagggaaaataaggcccaaatacagaaaggaaagttgaaagcg
tcgaaagatgaagagtacttggaagagcttttggaacaagaacgacaggagaccgagctg
agacgagaccagctggcagaagtggagaaagcagcacagcgtgagaaactcaaacagaag
gagtcactgatcgatgacctaatgttctcggatatgccggccagcaaaatccttgctagc
catggagacaagcttaagcaggtggcaggcccaaaaccgctacctccaaagccactttct
gcggagttctccacgggcataaagttccgaccgaaggaggctttccttccagtaccaaag
attgtcgaaggcccgctgtacaagtacacagcccccacagtggatatctgcgggccaaca
gccccgagcttggagtcgctttcacctttaggctacacaaaccacgtgcgggctacggtg
gaagcggaggaggctggaggtttcctggcggggctagcatgccagagggcactgcaagat
gcattttgcggtctgcatttcaaagtggctgaagaggtgtcgtga
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