Rhipicephalus microplus (southern cattle tick): 119159624
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Entry
119159624 CDS
T07403
Name
(RefSeq) polycomb group protein Psc-like
KO
K11459
polycomb group RING finger protein 4
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119159624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rmp03036
]
119159624
Chromosome and associated proteins [BR:
rmp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
119159624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-RING_6
zf-RING_UBOX
zf-RING_5
zf-Nse
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
119159624
NCBI-ProteinID:
XP_037268335
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All DBs
Position
1:complement(309043461..309128723)
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AA seq
693 aa
AA seq
DB search
MPGARLADLNSVITCMLCNGYLVDATTLIECLHSFCKVCIVQFLNTSLLCPICDVPVHQT
KPHQSIRLDRTLQNIVYKVVPGLYQKEMKKRRDYYEKHPEHVAGVSCPEDRGIVDDSSRL
IFSPDDTISLSLEYCGPLGKKEETPSGEKNEGKPTNPGKETEGGVPRRFLNCPAAFTINH
LQKFIRMKYSVAPQYQVDIIYMDEVLSQEFALMDVAYIYAWKRDSPMRLFFRICKMPPKP
SAVKGPPITACSEIKQMVENGTNSSTETEVAKEPAENKPADESRTAMPPPRAPEQENKPA
AKTPPAPAGAVLKSVPQPEEPREPAVTAAPATEPSIATIAPAAEHHAPETPEMKTAAEEE
STAPGSPKAIALVQSTSPQRQKASEPPAEAQSPPPLPKITISGLDKNSHKILIHTKEVSH
TLGPALSPPQNGQDRSSPPYGKKSKRKEQHDIERHHQSKRKSPEKVDKRSQWCQSPQEDG
ISNKKLKLDGCDDAVEVDRKSISSPLQKSEGSVSISEAARRNMPKAMPILLKPAPPPPPP
AHPRTPPYTPIPPSLPRSEKDTQPLDLSVTHRGTVVGVSQDPPRRPRGRPSVPLPSVMPL
PLVTKRPSLPQTTTVTTTSYSPPTSVPTFHKMPAVPPTSSHHHHHHHHRGNSKSFRKNAN
LTCITPDPNAGHTKIVIRNMPPLNTNNNNLHRV
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcgcgaggctggccgacctcaactcggtcatcacgtgcatgctgtgcaacggc
tacctggtggatgccaccacgctcattgagtgcctccactcgttctgcaaagtgtgcatc
gttcagttcctgaacaccagcctgctatgccccatctgcgacgttcccgtgcatcagacg
aagccgcatcagtctattcggcttgacagaaccctccagaatattgtgtacaaggttgtt
cctggactttaccaaaaggagatgaagaaaagacgcgactactacgagaagcacccggaa
cacgtcgccggcgtgtcgtgtcccgaagatcgaggaatcgtggacgactccagccggctc
atcttcagccccgacgacaccatcagcctctcgctggagtactgcggccctttaggcaag
aaagaggaaactcctagtggcgagaagaacgaagggaagcctacaaaccctggaaaagaa
acggaaggaggggttccgaggcgcttcctcaactgcccggcggccttcaccatcaaccat
ctgcagaagttcatccgcatgaagtacagcgtggcaccgcagtaccaggttgacattatt
tacatggacgaggtgctttctcaagagttcgccttgatggacgttgcatatatctacgct
tggaaaagggattcacccatgcgcctcttttttcggatatgcaaaatgcctccaaagcct
tctgctgtcaaaggaccccccatcactgcgtgcagcgagattaaacagatggttgagaat
ggaaccaacagcagcacagagacagaagtagcaaaagaaccagctgaaaataaacccgca
gatgagagtcgaactgccatgccaccccctcgtgccccagaacaagaaaacaagccagct
gcaaaaacacctccggcacctgcgggtgcggttctcaaaagtgtacctcagccagaagaa
cctagggaacctgctgttactgctgctcctgccactgagccttccatcgcaactattgca
cctgctgccgagcatcacgcaccggaaacaccggaaatgaaaactgctgcagaggaggaa
tccacagctccagggagtccaaaggccattgctctggtgcagtctacatccccgcagaga
cagaaggcttcggagccaccagcagaggcccagtcgccaccgccactgcccaagatcacc
ataagcgggctggacaaaaatagtcacaagatcttgatacacaccaaggaggtgtcgcac
actttgggtccagccctctcgccaccccagaatggacaagaccgctcttcgcctccttac
gggaagaagtcgaaacgtaaagagcagcatgacattgagaggcaccaccagtctaagcgt
aagtcgcctgaaaaagtggacaaacggtcccagtggtgccagtctccacaggaggatggc
atctccaataaaaagctcaagctggatggctgcgacgatgccgtggaggtggacagaaag
tctatcagctctcccctacagaagtcagagggcagcgtatctatctcggaagcagccagg
cggaacatgccaaaggctatgcccatcctgttgaagcctgcaccaccaccgcctccgcct
gcccaccccaggaccccaccttacaccccgattccaccaagtctgccacgcagcgagaaa
gacacacaaccactcgatctgtcggtgactcaccgtggcactgttgtgggtgtatcccaa
gacccacctcgtcgtccgaggggcaggccttccgttccactgccctcagtcatgcctttg
ccattggtgaccaagcggccttccctgccacagacaacaacagtaaccacgacatcatat
agccctcctacctctgtgcctaccttccacaagatgccagctgtgccgccaacttcgtcg
catcatcaccatcaccaccatcatcgcggcaacagcaagagctttcgaaagaatgccaat
ttgacttgcatcaccccagatcctaatgcgggtcataccaaaatagtcatcaggaatatg
cctccactcaacactaacaacaacaacctccacagggtgtga
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