Rhipicephalus microplus (southern cattle tick): 119160124
Help
Entry
119160124 CDS
T07403
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119160124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmp03021
]
119160124
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119160124
Transcription machinery [BR:
rmp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119160124
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119160124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCHC
zf-CCCH_2
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
119160124
NCBI-ProteinID:
XP_037268737
LinkDB
All DBs
Position
1:247580544..247581410
Genome browser
AA seq
282 aa
AA seq
DB search
MEEVVARVGNVVFELEVALDRQLGALPLPFPGMDKSGAAVCSFYQKGSCGKGSACPFRHV
KGDRTVVCKHWLRGLCKKGDQCEFLHEFDMTKMPECYFYSRFNACSNKECPFLHIDPESK
IKDCPWYDRGFCRHGPLCRHRHTRRVMCMKYLCGFCPDGPECKFMHPMFDLPAPDPPQQG
LKNIVCHYCGETGHKALFCQKVPGDTREEQQFHVQLISHLKGAHRWDHGYGGGTITGRGK
RTFRPLDQVTCYKCGEKGHYANKCPKGHLAFLSSALQVSPHV
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagtcgtagcccgagtaggcaacgtcgtgttcgagctggaggtggccctggat
cgacagctcggcgcgctgccgctgccttttcccggcatggacaagtctggagcagccgtg
tgctctttctaccagaaaggcagctgcggcaagggatctgcgtgccccttccggcacgtc
aagggcgaccggacagtggtatgtaagcactggctacgcggtctatgcaagaagggtgat
cagtgtgaattccttcacgagttcgacatgacgaagatgccggaatgctacttctactcg
cgtttcaatgcatgttctaacaaggagtgcccgtttctgcatatagatcccgaatcaaaa
attaaagattgcccctggtatgacagaggcttttgcaggcacggcccgctctgtcgccat
cgacatacacggcgcgtaatgtgcatgaagtatctttgtggattttgccccgatggaccc
gagtgcaaatttatgcacccaatgttcgatctacctgctccagaccctccgcaacaagga
ttaaagaacattgtgtgtcattactgtggtgagaccgggcacaaggcactgttttgccaa
aaggtgcccggtgatacacgcgaggagcaacaatttcatgtgcagttaattagtcacctc
aagggtgcccaccgctgggatcacgggtatggcggcggaactatcactggacgagggaaa
cgaaccttcagacctctggatcaagtcacctgctacaaatgtggtgaaaagggacactac
gccaacaagtgccccaagggacatttggcttttctcagcagtgctctccaagtttctcca
cacgtgtaa
DBGET
integrated database retrieval system
