Rhipicephalus microplus (southern cattle tick): 119160771
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Entry
119160771 CDS
T07403
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit-like isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119160771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmp03000
]
119160771
Transcription factors [BR:
rmp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
119160771
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
RHD_dimer
RHD_DNA_bind
Ank_4
Ank
Ank_3
Ank_5
Curto_V2
Motif
Other DBs
NCBI-GeneID:
119160771
NCBI-ProteinID:
XP_037268900
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Position
2:complement(13783125..14195776)
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AA seq
852 aa
AA seq
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MPICASYEEQSLHTSGGARLVIVEQPMKETRYRYKSESGSHGPLIGESSTQQRKTFPTVK
LENYNVQLPHRIKASLVTAEDTARLHVHRITMRGRDDEDCCYVTVRENGTAMFPSMSIVF
QQKKTVADILYRRKIERLQPSEEEARQLQTEAKKEAAELNLNLVRICFTAECCEDGVWKP
LCVVYSNPVANSKAGKLRITKANRKSGSCKGGDEVWILCEKINKKDILIKFFEENEETKE
RTWEAPATFQESDVHYQVAIVFKTPPYRDTNLQHQVPVKFQLIRKSDNDCSEPFEFIYMP
CGPSDDELLAHKRRKLSHHSLEEASSHYSGIMGPPRGDSSSASTPTFGMATSYPASSPPP
GDVLGENLSLPVSEEDMEEMLKVMLESFSPPVRSELFEEVDFNKVPTPLESVIMATDGSG
LEASMGRLSLDSIASQHRTQGGNRHSGTTSFYHSSEKDKLDHTTMRDSFDEPTTIQNSKA
GDKLGIALYALVCWLMKELVSKCSTETLAELVTKIIPICDRNGNNAVHVAVRHPSYVLNP
VLKILASTKKYSVCINKQNNGGQTPLHLAAQGGRHDLVTILLRRGADCGLVDCAGRTILH
CAVLGSLPKGTLNAILSQPQVDHSVIDKEGKTALHLAVERRKTDALQTLCQAGLDVNAAV
DDGTRNRPLHLAIIADFVDGINILLKQDSIQVAAVNSDGMDALGIALDMKQEGIVEVLLV
HRELQEGKKNIGLIEMEQFRGESQKAEKFWTSALAKSESGHANIRSRVVEALECEDNATR
VLGLLHEGSTEAVLNKMVAFLRVSGLGNAIYKKYLQIVPDKELVLADMLSRASLKTASNN
TGATEEVNVHAV
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgcccatctgtgccagctatgaagagcagagcttgcacacgtctggtggtgctcggcta
gtgatcgtcgagcagcccatgaaggagacccgctaccggtacaaaagtgaaagtggctct
catggtcctctcattggggagtcaagcacgcagcaacgaaagacttttcctacagtcaag
ctggaaaactacaatgtacagttaccccaccgcatcaaggcaagcttggttaccgccgag
gacactgcacggctgcatgtacatcgcatcaccatgcgaggccgcgacgacgaggactgc
tgctacgtcacagttcgcgaaaatggcacagccatgtttcccagcatgtctatcgtcttt
cagcagaaaaagaccgttgctgatatcctgtacagacgcaagattgaaagattgcaaccc
tccgaagaagaagcgcggcagcttcagactgaagccaagaaagaagcagctgagctgaat
ttgaaccttgtccgcatctgctttacggccgagtgctgtgaagacggtgtctggaaacca
ttgtgtgttgtttactccaacccagttgcaaactcaaaggctggaaagctcagaataacc
aaagcaaatcgcaagtcaggatcgtgcaaaggtggtgatgaggtctggattctctgtgag
aagatcaacaagaaagacatcctgataaagttttttgaagaaaatgaggagacaaaagaa
aggacgtgggaggcaccagctacatttcaggaatcagatgtacattaccaggtggccata
gttttcaagacgcctccgtatcgtgacaccaatttacagcaccaggtgccagtcaaattc
cagctgattcgcaagtcggataatgactgcagtgagccatttgaattcatctacatgcct
tgtgggccttctgacgacgagcttttggcccacaagcggcgcaagctcagtcatcactcg
ctcgaagaggcttcatcccactactcgggcatcatgggtccacctcgtggcgacagcagc
agtgctagcacaccgacatttggcatggctacctcatacccagcgtcttcaccaccaccc
ggtgatgtgctaggggaaaacctgtctcttccggtgagcgaggaagacatggaagaaatg
ttaaaggtcatgttggaaagctttagcccccccgtacggtctgaactgtttgaagaagtc
gacttcaataaagtgcctactcccctggaatcggtgatcatggccaccgatggaagtggg
ctggaggcttccatgggaagactttctctggacagcatagccagccaacatcgaacacaa
ggtggaaatcgacatagtggcaccacttctttctaccatagctctgaaaaagacaagtta
gaccacacgacaatgcgtgactcgtttgacgagcctaccactattcagaacagtaaggcg
ggtgacaagcttggcatagcactgtatgctctggtctgctggctcatgaaggaacttgtg
agcaagtgctcgaccgaaaccttggctgaactggtcactaagataattccaatctgtgac
aggaatggaaacaatgctgtgcacgtggctgtaaggcatccttcatatgtgctcaacccc
gtattgaagatcttagcaagcacaaagaagtatagtgtgtgtatcaacaagcaaaataat
ggaggacagacaccattgcatttggcggcacagggcgggcgacatgacctagtgacgatc
ctactgcgccgtggagccgattgtggactggtggactgtgcaggtcgcactattttgcac
tgcgctgtgcttggatcactgcccaaggggactctgaatgcaattctgtctcagccacaa
gtggaccacagtgtgattgacaaagaaggcaagacagctttgcatcttgctgtggagcgg
agaaagactgatgcccttcaaacactctgccaagccggccttgatgtcaatgctgctgtg
gatgatggtacccgaaacaggcctctccacttggctatcatagcagactttgtcgatggc
atcaacattctactgaaacaggattcgatccaagtggctgctgtcaacagtgatggcatg
gacgccttaggcattgccctggacatgaaacaagagggcatcgtggaggtcctattagtg
cacagagagctacaggaaggaaagaaaaacattggcttgattgaaatggaacagtttcga
ggggagagccaaaaggcagaaaagttttggaccagtgctcttgcgaaatcagagagtggc
catgcaaatattcgatcgagagtggtggaagccttagagtgcgaggataacgcgaccaga
gtccttggtctgctacacgagggaagcacagaagccgtgctcaataagatggttgctttc
cttcgagtttctgggcttggtaacgctatctacaagaaataccttcagattgtcccagat
aaagagcttgtcctagctgatatgctttcgcgagcgtccctgaagactgcaagtaacaac
accggggcaaccgaagaggtcaatgttcatgcagtataa
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