KEGG   Rhipicephalus microplus (southern cattle tick): 119160958
Entry
119160958         CDS       T07403                                 
Name
(RefSeq) roquin-1-like
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
rmp  Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:rmp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rmp03000]
    119160958
   04121 Ubiquitin system [BR:rmp04121]
    119160958
Transcription factors [BR:rmp03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    119160958
Ubiquitin system [BR:rmp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    119160958
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-CCCH TFIIA zf-CCCH_UNK zf-CCCH_4 zf_CCCH_4 Vesi_VP2 Zn_finger_prot PAT1
Other DBs
NCBI-GeneID: 119160958
NCBI-ProteinID: XP_037269139
LinkDB
Position
2:71206031..71350082
AA seq 831 aa
MPVQAPPPHSWGSMAAAAARNACCCCRGRAAPPEGGCHAPQCHAHHSQRQQQQPQPQQQQ
QQQQPQQQQPQQHHHHQQQRKQQQQPRQRCHLPENGLPPRLHLVSAPPPPPVAAAVAAGT
PVVPAVAPAGATGAPEESAEQAVTRCVHEMALLLRPAAQGGCWLSRPLQRKLVALVHCSL
SEPEGRARAARAARSLGERCALELLLQHHQHSQAGGGAGGGGQQLSAALWAAVRARGCQF
LGPHMQEEVLRLVLLALEDGSPLSRKVLVLFVVQRLAPHFPQASKTSIGHVVQLLYRASC
FKVSKREGDSSLMQLKEEFCTYEALRREHDAQIVQIASEAGLRIAPEQWSSLLYGDAAHR
SHMQSLVDKLQSPQSFAQSVHELSLALQRTGDPAGLAALRPHFDFLARWEPPPDGGAPTW
EELRRCVLAARACLQGLVAFMGAFGGRRMNGGGGGAPPPSSPPGRGRAETGGGSPSHNSG
GSRYKTSLCRDVVQRGSCPRGAHCTFAHSQEEMDRKPPYVRRNRYRKVFTAKKHSAPVQN
SPPSERYRARRPPRTSVDMSKPGVSNESQAASTRIYEAGRSTDHMLAACPPVPISLCESP
PPPMLAPPLSLCLDPGPPPVVPIGLNPESPAFHPDEPWLSPSPPCQDDDDDWGSSHGSCE
SSTSSHHPTRPCPSEEDPLVPFDPPLVSKYGPISRCARTLVRGPAPIQVTSRQPQELTSP
TAALRLPLPSAAAAPSLYAQGFALLPSDLAYGALADPPPPLLYPFNGTRPFTPPAGALPA
TPPALVTPPTKGSESWAGQPQVPTSVGPWLLNQLEESAQFCSDNCWTHQGH
NT seq 2496 nt   +upstreamnt  +downstreamnt
atgcctgtgcaggctccgccccctcattcgtggggcagcatggctgcagccgcagcccgc
aatgcctgctgttgctgccgtggccgtgctgcacctcctgaaggaggatgtcacgcaccc
cagtgccatgcccatcactcccaacgacagcagcagcagccgcagccgcagcagcagcag
cagcagcagcagccgcagcagcagcagccgcagcagcaccatcatcatcagcagcagcgg
aagcagcagcagcaaccgcggcagaggtgccatctacctgagaatggacttcccccgcgc
cttcacctagtctctgcgccccctcctccacccgtggcggcagcagtggcagctggtacc
cctgtggttccagcagttgcacctgctggtgccactggagctccggaagagagtgccgag
caagcagttacacggtgtgtccacgagatggcactccttctcaggcctgctgctcagggt
gggtgttggctgagccggcccttgcaacgcaagctggttgccctggtgcactgctcgttg
tccgagccagaggggcgggcccgggcggcccgtgcagcacgctcgctgggcgagcgctgt
gcccttgagcttctcctccagcaccaccagcacagccaggctggcggcggagcaggcgga
gggggccaacagctgagcgctgccctgtgggcagccgtacgtgcccgtggctgccagttt
ctggggccccacatgcaggaggaagtgttgaggctggtcctccttgccctcgaagatggg
tcacccctgtcgcgcaaggtattggtgctgttcgtggttcagcgcctggcgccgcatttc
ccccaggcatcaaagaccagcattggccatgtggtgcagctgctctacagggcatcttgc
ttcaaggtgtccaagcgagaaggcgactcatcgctgatgcagctcaaggaagagttctgc
acgtatgaggctctgcggagagagcatgacgcgcagattgtccagattgccagcgaggca
ggcctgcggatcgcacctgagcagtggtcatcgcttctctatggcgatgcggctcaccgg
tcgcatatgcagtcgctggtggacaaactgcagagcccgcagtcctttgcccagagcgtt
cacgagctgtcgcttgcgctgcagaggacgggcgaccctgcgggactggctgcgctgcgg
ccacactttgatttccttgcccgttgggaaccgccgccagacggtggtgcaccgacgtgg
gaggaactgaggaggtgtgttctggcagcccgtgcctgccttcaagggctggtggcattc
atgggggcatttgggggtcggcgaatgaacggagggggtggaggagccccgccgccgtcg
tctccacccgggaggggcagggccgagacggggggtggcagtccgagccacaactcgggt
gggtcccgctacaaaacgagcctgtgccgggatgtggtccagcgtggctcatgccctcgt
ggggcccactgcacctttgctcattcccaggaggagatggacagaaaaccaccttatgtc
cgacgaaaccggtaccgaaaagtcttcaccgcgaaaaagcacagtgcgcctgtgcagaat
tcgccgccatctgaaaggtaccgtgcaaggcggcctccaaggacgtctgtagatatgtcc
aagcccggtgtcagtaatgaatcccaggctgccagcaccaggatctatgaagcaggccga
agcaccgaccacatgctggcagcttgtccgccagtaccgatcagcctgtgcgagtcgccg
ccgccacccatgctagcccctcctctttccctatgtttggatcctgggcctccacctgtt
gtcccaatcggcctcaatcccgaaagcccggccttccacccggacgagccctggctcagc
ccttctccaccatgccaggatgatgacgatgactggggctccagccatgggtcctgtgag
agctctacctcgagccatcatcccactagaccttgcccatccgaggaggaccccttggta
ccctttgaccctcccctggtctccaaatatggccccatctcccgctgtgcacgaaccctc
gtcagagggcctgctcctatccaggtgacgtcccggcaacctcaggaactgacaagcccc
actgctgccttgcgtttgcccttgccatcggctgcagctgccccttcgctctacgcacag
ggttttgccctcctccctagtgacctggcctatggagctttggccgatcctcctcctcca
ctgctgtaccctttcaacgggacacgccctttcaccccccctgcgggagccctgccggcc
actccaccggcactcgtcacgcctcctacaaagggaagtgagtcctgggcggggcagccc
caggtgccaacgtctgtgggtccctggctcctaaaccagctggaagagtcggcacagttc
tgctccgacaactgctggacccaccaaggacattag

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