Rhipicephalus microplus (southern cattle tick): 119161249
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Entry
119161249 CDS
T07403
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp04140
Autophagy - animal
rmp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119161249
04148 Efferocytosis
119161249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rmp04131
]
119161249
Membrane trafficking [BR:
rmp04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
119161249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CNH
Vps39_1
zf-Vps39_C
Clathrin
TPR_Vps41
Sushi
Motif
Other DBs
NCBI-GeneID:
119161249
NCBI-ProteinID:
XP_037269519
UniProt:
A0A6M2CP43
LinkDB
All DBs
Position
2:134353587..134357940
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AA seq
895 aa
AA seq
DB search
MYEAYTAFPIIKKMPLKVESVAAHGDKLYLGTKDGHLLVYTVVVKDSADGPKFAVNLDFS
NKVFAKKPITQLCDIPELNLLISLSDGSLSVHHLSLEPNTPPIDCPALAKCKGCTLFAVN
VQEKTTLTGEVKITLMLCAAVKRKLELFYWKNNTFCEHPQGLCVPDTPRSIVWCGDESLL
VGFRSEYNILKLCGETKQLFPTGKQPEPLCVKLKENSFALSRDDMTIFVNREGQPTHKYA
VTWSEPPISLCYDHPYLLSAQSFGVEVRTVEPRALIQKVNFLKPKLLRLCKKGQLYVIAP
SGAVWCVLRTRVQDQIPQVLKDKCFELALKLADLSDQTEEERNASKRHIQNLHAFDLFCK
KKFEESLNIFMDLETDPSHVIGLFPDLLPEDYRNSISYPDKAPDLRDSDLEAGLYALVDY
LVHVRCKLLSYNQQEPALTGIVQGSKTVKSKKQLLQIIDTTMLKCYLETNVALVASLLRL
PDNFCHLDECERALKKHQKLSELIILYQQKNQHEKALDLLMREAHKADSPLKGHERTVGY
LQHLGRKHMELILRYSLWVLEEHPEEGLKIFVEDQQEKEGEALPRDIVLDFLSKKAPHLV
IPYLKHVIHKWNDDTEMFHNTLIHKYIESVRSLLSQQHSLVGPGEPGSVGKLRKELVHFL
DASDRYTAENFPTHLLSDGLFEEAAVVMGKLGRHSEALEVYIYVLRDPSKAEQYCASQYS
RNPERNRDVFLILLQMYLQAPDEGSRVLDLCRRTVANIAGLPSPLTIPKSCREQNLKGAL
KILMDHVKEIDPLRALQMIPGNVQVEDVRDFLREVLDGCTKELHAAGLQRSLLFAEHLQV
KERCIRVKSLKITLTELDVCYVCQKRIGSSAFARYPDGAVVHYSCREGYESRLAS
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaggcctacactgctttcccaatcatcaagaagatgccattgaaggttgagtcc
gtagctgcgcacggagacaagctgtatttggggacgaaggacggtcacctacttgtttac
accgttgtcgtgaaagatagcgccgacggtccgaagttcgctgtcaatctggatttttcc
aacaaagttttcgccaagaagccgatcacccaactttgcgacattcccgagctgaacttg
ctcattagcttgtctgacggctccctgagtgtgcatcatctcagcctcgagcctaacaca
ccacccatcgactgcccagctttggccaagtgtaaaggatgcacattgtttgctgtcaat
gtacaggagaagacaacgcttacgggtgaagtcaaaataactctcatgttgtgcgcggct
gtgaagcgcaagcttgaactgttttactggaaaaacaataccttctgcgagcacccgcaa
ggcctgtgcgttcccgacactccgcgatctattgtgtggtgtggtgacgaatctcttctc
gtagggtttagatccgaatacaatatcctaaagctgtgtggggagacgaaacaacttttt
cctacaggaaagcaaccggaaccgctctgtgtgaagctaaaagaaaatagctttgctctc
agtagagatgacatgactatcttcgtaaatcgcgaaggtcagccaacgcacaagtatgca
gttacttggtcagaaccgccgatttctctctgttatgaccacccgtatctcttaagtgca
cagtcgttcggtgtcgaggtgcggacagtggaaccgcgagctctaattcagaaggtaaac
ttcctgaaaccgaaacttctccggctgtgcaagaaaggccagctgtacgttatagcgcca
agtggtgcagtctggtgcgttctgcggactcgcgtgcaggaccaaattccgcaagttctt
aaggacaagtgctttgaactggctttgaagctagctgatctgtccgaccagactgaagag
gaacgcaatgcaagcaagcgccacatccagaacctgcatgctttcgaccttttctgtaag
aaaaaatttgaagagtccctgaacatctttatggatcttgaaactgatccatcacatgtc
ataggccttttcccagatcttttgcctgaggactatcgtaattctatctcgtaccctgat
aaggcaccggatctcagagatagtgatctggaggctggtctttatgcacttgtagactac
ttggttcatgtcagatgcaaattgctttcatacaaccaacaggagccggctcttactggc
atagtgcaaggcagcaagacagtaaaaagcaagaagcagctgctacagattattgacacc
acaatgctcaagtgctaccttgaaaccaacgtggcattagtagcctcgctgctacgcctc
ccagacaacttctgtcatctggacgagtgtgagcgcgccctcaagaagcatcaaaaactt
agtgagctcatcatattgtaccagcagaagaaccagcatgaaaaggcacttgatttgctc
atgagagaggcacacaaggcagactcacccctgaaaggccatgaaaggactgttggctac
ctccagcacttgggcagaaagcacatggagctcatactgcgttactcattatgggtgctt
gaagagcacccggaggaaggtctcaagattttcgttgaagatcagcaagagaaagaaggt
gaagccttgccgcgagatatagtgctcgacttcttgtccaaaaaagcaccacacctagtt
ataccttaccttaaacacgtcatccataaatggaatgatgatactgaaatgtttcacaac
acactcattcacaaatacattgaatctgtgcggtctttgctttctcagcaacattctctt
gttggtcctggtgagccaggctcagtgggaaaactgcgtaaagaattggtacattttttg
gatgcctctgacaggtacacagctgaaaactttcccacacacttgttaagcgatgggctg
tttgaagaggcagctgtcgtgatgggcaagcttggacgacatagtgaagcccttgaggtc
tacatatatgtattaagggacccatccaaggcagagcagtattgtgcatcacaatacagc
cgcaatcctgagcgcaatcgagacgtattccttatactgcttcagatgtacttgcaggct
cctgatgaaggttccagggttctggatctgtgtagacgtactgtagctaacattgcaggg
ttgccgtctcccttaacaattcccaaaagctgtcgtgaacaaaacttgaaaggtgcgctc
aaaatattaatggatcacgtgaaagaaattgacccattgcgtgccctccaaatgatacct
gggaatgtgcaggtggaagacgttcgagattttctccgagaggtgttagatggttgcacc
aaagagctgcatgcggctggtctgcagaggtcactgctgtttgccgagcacttgcaggtc
aaagagcgttgcatacgtgtcaagtcgctgaagataacgctaacggagcttgatgtttgc
tatgtgtgtcaaaagaggataggaagcagtgcctttgccaggtatccagatggtgcagta
gttcattactcttgccgagaagggtatgagtcaaggttggcatcatga
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