KEGG   Rhipicephalus microplus (southern cattle tick): 119161265
Entry
119161265         CDS       T07403                                 
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
rmp  Rhipicephalus microplus (southern cattle tick)
Pathway
rmp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rmp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    119161265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rmp04121]
    119161265
Enzymes [BR:rmp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     119161265
Ubiquitin system [BR:rmp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    119161265
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     119161265
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_EIPR1 WDR55 Beta-prop_RIG_2nd zf-C3HC4_2 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR19_1st zf-C3HC4 Beta-prop_DCAF4 Beta-prop_EML Beta-prop_CAF1B_HIR1 zf-RING_2 ANAPC4_WD40 zf-RING_UBOX zf-C3HC4_3 Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N WD40_RFWD3 zf-C3HC4_4 WD40_MABP1-WDR62_1st zf-RING_5 RING_XB3-XBAT31 Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_SCAP Beta-prop_IFT140_1st Prok-RING_4 zf-RING_10 U-box zf-rbx1
Other DBs
NCBI-GeneID: 119161265
NCBI-ProteinID: XP_037269544
LinkDB
Position
2:complement(135492763..135551090)
AA seq 587 aa
MNNDFLCPICFDIIEEAHMTPCGHTFCFKCITTGLEYSNRCPKCNFAIEKKEQIYPNFLL
NELITKYKQKAADKKLKLEGNSPVVSELFELILQESDSMNLNDVSYMLDVLSQKKHQLEA
DCKAAQAQLLREFLQQVRKHKQEQMHQLTTELSFIDEDLKRVEENSKSPDNCWLVDPTSC
LAGGDSASSANASIMQDGFNGSKHGSKPQWVQTTLASRRKRVHLHFDDLEDCYLTARMKG
FHGISADGLKEFTENLSKFTRYSSMRPLATLNYATDLLNGTSIVSSIEFDKDNEFFAIAG
VTKKIKVFEYGTVIQDIVDIHYPVNEMMCNSKISCISWSSYHKGMLASSDYEGTVTIWDA
FIGQKVKMYQEHEKRCWSVDFNKADTKIIASGSDDAKVKLWSLSCDHSVASLEAKANVCC
VKFNPDSRYHLALGSADHCVHYYDLRSLKQPLGVFKGHKKAVSYVKFLNTTELVSASTDS
QLKLWNISKPHCLRSFKGHLNEKNFVGLATDGDYVACGSENNALYIYYKGLSKQVLTFRF
DVVRNILEKDKKEEDSNEFVSAVCWRMGSSVVVAANSQGTIKVLELV
NT seq 1764 nt   +upstreamnt  +downstreamnt
atgaacaacgatttcttgtgcccaatatgcttcgatataattgaagaagcacacatgaca
ccttgtggacacactttttgcttcaagtgcatcacaactggcctggaatacagtaaccgt
tgtccaaaatgcaatttcgcgattgaaaagaaggagcaaatctatccgaactttctgttg
aatgagcttattacgaagtataagcaaaaggctgctgacaagaaactgaagttggagggc
aatagcccagtagtgtcagaattatttgaacttatcctgcaggagtctgacagcatgaat
ttgaatgatgtcagctatatgctggacgttctttcgcagaagaagcatcagttggaggct
gactgtaaagcagcccaagcacagctcctgagagagtttctgcagcaagttcgcaagcac
aagcaagagcaaatgcaccagcttacaactgagctgagcttcattgatgaagaccttaaa
cgtgttgaggaaaattccaagtctccagacaattgttggcttgttgatcccacatcttgt
ttagctggtggtgatagcgcaagctcagcaaatgcaagcattatgcaggacgggttcaat
ggcagcaagcatgggagcaagccccaatgggtgcagaccactttggcctcccgtcgaaaa
cgtgttcatctacactttgatgatttggaagactgctacctcacagcacgaatgaagggc
ttccatggcatttctgccgatggcttaaaggaattcacagaaaatctttcaaagttcaca
aggtacagcagtatgcgcccattggcaacactcaactatgccactgatctgctcaatggc
accagcattgtgtccagcatagaatttgacaaggacaatgagttttttgccatagctggg
gtcaccaagaagataaaggtctttgaatatggcacagttatacaagacattgtggacatt
cactacccggtcaatgagatgatgtgcaattcaaagataagttgcatcagttggagttca
tatcataagggtatgctggcttccagtgactacgaaggcactgttaccatctgggatgcc
ttcattggacagaaagtcaaaatgtaccaggagcatgaaaagcggtgctggagtgttgat
ttcaacaaggctgacactaagattattgcatcagggtcagatgatgcaaaagtgaagtta
tggtctttatcctgtgaccattcagtggcctctctggaagccaaggcaaatgtttgctgt
gtgaagttcaacccagactcaagatatcacttagcgcttggctctgccgaccactgcgtg
cactactatgatttgagaagtctgaagcagccgctaggtgttttcaagggccacaagaag
gctgtttcttatgtgaagttcctcaacacaacagagctggtgtctgcctccactgacagc
caacttaagctgtggaatatcagcaaaccccactgcctgcgttcattcaagggtcacctc
aatgaaaagaactttgttggccttgcaactgatggggattatgtggcatgtggaagtgaa
aacaatgctctgtacatttactacaaggggctgtccaagcaagtgctgactttcaggttt
gacgtggtacggaatattttggaaaaggacaagaaagaggaagacagcaatgagtttgtg
agtgcagtgtgctggagaatgggctccagtgtagtagtagcagctaacagtcaaggaact
atcaaggtactggagttggtataa

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