Rhipicephalus microplus (southern cattle tick): 119161434
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Entry
119161434 CDS
T07403
Name
(RefSeq) zinc finger SWIM domain-containing protein 8-like isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rmp04121
]
119161434
Ubiquitin system [BR:
rmp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
119161434
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
119161434
NCBI-ProteinID:
XP_037269790
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All DBs
Position
2:168109121..168356194
Genome browser
AA seq
1882 aa
AA seq
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MFDWDEGDRFSFEDSDRFEEDSLCSWISEPESLCNNWRGWKRPTGNTSHASALHGGHCRS
KAEGGQPLSLVELAAREVAAHIPFEVVEHVYPPVPEQLQLRIAFWSFPENEEDIRLYSCL
ANGSPEEFQRGEHLFKAKATKDLLQIGFHLSATVHPPQSLPVSKGSYNVAVTFDRCRITS
CNCTCSSAASWCSHVVAVCLHRIHQPNQVCLRAPVSESLSRLHRDQLQKFAQYLISELPQ
QILPTAQRLLDELLSSQKTAINTLRGAPDPTAGASAYEQTTWCLDEGTLHENIRKILIKL
CVPSPMVFSDVNYLSSTAPPAATEWCSLLRPLRGREPEGMWNLLSIVREMFRRSDRNAIP
LLQILTEEVLACEQILCWWFNTKVSLHTGSNGHGGRAVGHGNAHSSQHACSSLCDEIVVL
WRLAALNPALSPQDRRSFFVQMGEWHVKTLERVCKVRASGNNVVGTGGNGTGGNGSLSGA
RRSDLDVFPGFRPSLEACLLDWTDYPIEGITYADGGACRWYSPYMHTRLLEHNPRADPLP
DFLCGSEHLTSLCRRGRAVDVGSSAAGTSHHCDRRPIHVLCATGHHQLTPLMSLGHDLSL
LAGNTAGMATGGGSNRSSLSSEGFCENEDSAGDFLLSSVAPRLVLSGARDPSSATCSSSA
SMPKDNAALTSGISDPDGVSALGEKSSSPEDADSDWSGTREGIQQGPDGNCNMDVKGDDR
VTAGEEYHVYYFSSQGKGPGGDRNRDLRVQAEDCVPVQIKKIEDPFEILFARAEALHAHG
HTQEASKLAVRLAHELLAHPPSLEVEGLIASAQPGKTTGNRRGRRFNPVWHQVSLLASAT
LAKAAFLCQVLGENQEHHHLAFRIGLFGLEMSRPPASTKALEVKLANQEQDLVSLLKKIP
LGDAELNDIREKAEALRDHRLQSRGDALLPLMLSSYIFDALVLSKNNTKGAPNPGTKLSS
DEALGFEAAVAALGLKANVSEAEHPLLCEGTRRQRGDLSITLLVFYKDDQEKLAKIMDRL
LDKEVHQMYKSPPLSSYYSTSTTPVAAALNASIPASESTSGSPSCTPQTKADDLAPSTSS
PSTSSAAERSTDSTSCVSATNCLGDATAVVAASGATVAATAESGSPPPLASGGMRQEPSG
GARVKSHRHNRSAGDSGDRSEGASSPGWEENYKVWEAKFRCTNFRTTKKHSAGMASIDSS
APETTSSDNSPTVVRRGGWGRPCGPGSDSGSSGESSDSVVSSSSGDRATGVKGRHTDSLC
VLPSDSPPPNLHASVGAAPSRFLASGGGALSGAGGGSRAPAAVAAAPQKPPPPSRLKGKR
GACPSLPNQPSEASAHFMFELAKTVLTKAGGNSSTAVLFTQPSASQNHRGPHRALHMCAF
QIGLYALGLHNAVSPNWLSRTYSSHVSWITGQAMEIGSSALMFLMDTWEGHLTPPEVASL
ADKASRGRDPAMVRAAAQLALSCLPHAHALNPNEIQRALLQCKEQSAAVLEQACLAVESA
AKGGGVYPEVLFDVARRWFELYEETTQGTGDAPASGGDAAPRGNSPPGLAAPSLEGNGLP
DVAASFVMDSLSPAPAPQLPMVPPLQYTLPYRAPPYPYIGSLPAFHHPHLLVTQHPAYLQ
APPTYQYPPLPSHAQFYAAASRHGAPPQAPPPAYTHQMIGVHVTPMARAVLSMAAPPPAP
PPPPAAPQQGQVHQLNQTQLNYLLSSYRVGLLAMETLARRVHDDRPQAKYARNPPYGEDV
KWLLGVAKKLGTSYLQEFCICTVNSVASPFILYDIVTDTAHHLSRSGSASLTMPIRSHVL
TPLIQKCQQMFIACTHTKMYHITSVEYDEFINTLRSARAAFMLTPGGMVQFTELLHSLRR
SKSCKKDLWQRINTMASSSAPI
NT seq
5649 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgggacgaaggagatcgcttttccttcgaggacagcgaccgctttgaagaa
gattctctctgctcttggatcagcgagcccgaaagtctctgtaacaactggagaggttgg
aaaaggccgacgggcaacacatctcacgcttcggcgcttcacggcggtcattgtcgctcg
aaagctgaaggaggccagccgttgtccttagtggagcttgcagctagggaggttgctgca
cacattcctttcgaagtggttgaacatgtgtatccaccagtcccggaacagctacaactg
cgcattgctttttggagtttccctgagaacgaagaagacattagactttattcctgcctg
gccaatggaagtccagaagaatttcaaaggggagagcacctcttcaaggctaaggcaact
aaggaccttcttcaaattggcttccacttgagtgctacggtgcatcctcctcagagcttg
ccagtgtccaaggggtcatacaacgtggctgtgacttttgatcgttgtcgcatcacatca
tgcaactgcacttgtagcagtgctgcctcctggtgctcccatgtggtggcagtctgcttg
cacaggattcaccagccaaaccaagtctgcctgagggcaccagtgtcggaatccctatca
aggcttcatcgtgatcagcttcaaaagtttgctcagtatcttatcagtgagctcccacaa
cagatccttcccactgctcagcggttactggatgagctgctttcaagtcagaagactgcc
atcaacacattgcggggagcaccagatccgacggctggagcatctgcatatgaacagacg
acatggtgccttgatgagggaaccttgcacgaaaatatacgaaagattcttattaagctt
tgtgtcccatcaccgatggtgtttagcgatgtcaactatctgtcctcaacagcaccacca
gcagccactgaatggtgcagcctactccgcccacttcgtggcagggagcccgagggcatg
tggaatctgctgtctattgttcgtgaaatgtttcgtcgttcagatcgcaatgccatccct
cttctgcagatcttgacggaagaagttttggcctgcgaacagatcctgtgctggtggttt
aacaccaaggtctccctgcataccggatcaaatggccacggaggtcgcgcagtcggccac
ggcaatgcccactcgtcgcagcatgcctgcagcagcctttgtgatgagattgttgttctg
tggaggctggctgctctcaacccagccctgtcacctcaagataggcgctccttctttgtt
cagatgggcgagtggcatgtgaagacattggaacgggtctgcaaagttcgtgcaagcggc
aacaatgtggttggcacaggcggaaatggcacaggcggaaatggtagcctgagtggggct
cgtcggtccgacctggatgtgttccctggcttcaggccctcactggaggcctgtttgtta
gactggacggactaccctattgaaggaatcacctatgccgatggcggtgcttgcagatgg
tactcaccatatatgcacacgcgcctactggagcacaacccacgggctgacccacttcct
gacttcctttgtggcagtgagcacctgactagcttgtgtcgtaggggccgtgctgttgat
gttggctcttcagcagctggcacttcgcaccactgcgaccgccggcccatacatgttctc
tgtgctactggacaccatcagctcaccccactgatgtcacttgggcatgatttgtctctc
ctggctggcaacactgctggaatggctactggtggtggtagtaacaggagctccctcagc
tcggaaggattttgtgaaaatgaagattctgctggagatttcctgctttcatcggtagca
cctcgtcttgtgctgtccggtgctcgagacccatcatccgcaacctgcagcagcagcgca
agtatgcctaaggataacgcagcactgacttctggaatcagcgatcctgatggtgtgtct
gctttgggagaaaagtcttcttcacccgaggatgcagactctgattggtctggcaccagg
gaaggcattcaacaaggcccagacgggaactgtaacatggatgttaaaggggacgataga
gtgacggctggggaggagtaccatgtctactacttcagctctcaaggaaagggtcccggt
ggtgacagaaacagggatctcagggttcaagctgaagattgtgtgcctgtgcaaatcaag
aaaattgaggatccattcgagatcctgtttgcccgtgcagaagcactgcatgctcatggt
cacactcaggaggccagcaaactggcagtgcgcctggcacatgagcttctggctcatcca
ccaagtttggaagtggaaggtttgatcgcatcagctcagcctgggaagacaaccggcaac
cgccgtggccgtcgtttcaacccggtctggcaccaggtgagccttttggcatcggcaact
ttggccaaggctgctttcctatgccaagtgctgggtgaaaaccaagaacatcatcacttg
gcctttcgcattggactgtttgggctggagatgtctcggccaccagcttcaacaaaggct
cttgaagtcaagttggccaaccaagagcaagatctcgttagcctgttgaagaagatacca
ttgggggatgcagagttgaatgacatcagagagaaggcggaagcactacgcgatcatagg
ctgcagtctcggggtgacgcattgcttccactgatgctttcaagctacatcttcgatgcc
ctggtgctttccaagaacaacactaaaggtgcaccaaatccaggcactaagctgtcatca
gatgaagctttaggttttgaagcagctgtagctgctttaggattaaaggcaaatgtatca
gaagctgagcatccattattgtgcgaaggaacaagacggcagaggggtgacctcagcatt
actttgctggtgttctataaagatgatcaagaaaaacttgccaagattatggatcgcttg
ctggacaaagaggtccaccaaatgtataaaagcccgccacttagttcttactacagcacc
tctactacccctgtggcagcggcgctaaatgcatcaattcctgcatctgagagcacatct
ggcagcccttcctgcacgccacagacaaaggcggatgacttggcaccatctacttcttca
ccatctacaagcagtgctgcagaacgtagcacagactccaccagctgtgttagtgcaacc
aactgccttggtgatgccactgcagttgtggcagcatcaggagccacggtagctgcaaca
gctgaatctggaagtccacctcctttggcttctggagggatgcgccaggaaccctctggg
ggagcaagggtcaaatctcatcggcacaacagaagtgctggtgacagtggtgatcgtagc
gagggggcttcaagtcctggctgggaggagaactacaaggtttgggaagcgaaattccgg
tgtaccaactttcgcacaacaaagaagcattcagcaggcatggccagcattgacagcagt
gctcctgaaacaacatcaagtgacaactctcctacagtggtgcggcgtggtggctggggt
cgcccgtgtggacctggcagtgacagtggcagcagtggcgagagtagcgactctgttgtg
tccagctcctctggggaccgggccactggggtcaagggtcgacacacggacagcttgtgt
gtgcttccatcggacagcccgccaccaaacttgcatgcatcagttggggcagcaccttca
cgcttcttggcatccggaggtggggccctttctggggctggtggtgggtctcgggctccg
gctgctgttgctgcagcccctcagaagcccccacctccgagccgcctgaagggcaagcga
ggtgcatgcccaagcctgcccaaccagccgagcgaggcctcggcccacttcatgtttgag
ctagccaagactgtgctgaccaaggccggtggcaactcgagcacggcggttttgttcacc
cagccctcggccagccagaaccacaggggcccccaccgagcactgcatatgtgcgccttc
cagattggcctctacgcattgggcttgcacaatgcagtctccccaaactggctgtcgcgc
acctattcctctcatgtttcctggatcacagggcaagccatggaaataggcagcagtgcc
ctcatgtttctaatggacacatgggagggccacctgacacccccggaagtggcgtctttg
gcagacaaggcatcgcgaggccgggatccagccatggtgcgggccgctgcacagctggcc
ttgtcctgcttaccgcatgcacacgctctcaaccctaatgaaatccagcgagccctactc
cagtgcaaggagcagtctgctgctgtgcttgagcaggcatgcttggctgtggagtctgct
gccaaaggaggtggcgtttacccagaggttcttttcgacgttgctcgccgatggtttgag
ctgtatgaggaaactacccaagggacaggagatgctcctgcctctggaggggatgcagca
cctcgtgggaactcccctccaggcttggctgcaccatctttagaagggaacggcctgcct
gatgttgcagcatcctttgtcatggatagcttgagtcccgctccagcaccacagcttccc
atggttccaccacttcagtacacgctaccataccgggcacccccttacccatatattggt
agccttccggctttccaccaccctcacttgctggttacccagcaccccgcctaccttcag
gctccaccgacataccagtaccctcctttgcccagccacgcccagttttatgctgctgcc
agtcggcatggtgctccaccgcaggcaccacctcctgcatacacacatcaaatgattggc
gtgcacgttacacccatggctcgagcagtgctatcaatggccgctccgcctcctgcacct
ccaccgcccccagcagctcctcaacaaggacaggtgcaccagctaaatcagacgcagctg
aactatctcctgtcatcctatcgtgttgggcttctcgccatggagacgctggctcgcagg
gtgcatgatgacaggcctcaagcgaagtatgcacgaaacccgccttatggagaagatgtc
aagtggcttctaggagtggccaaaaaactaggtacctcctatttgcaagagttttgcatc
tgtacagtaaacagcgtagccagccctttcatcttgtatgatattgtcacggacacagct
catcacttatcacgctctggctcggcatcactgactatgccaattcgatctcatgtcctc
acaccactcatccagaagtgccagcaaatgttcatcgcctgcacccacaccaagatgtac
cacatcacctctgttgaatatgatgaattcatcaacacccttcgtagtgctcgtgcagct
tttatgctgactcctggcggcatggtgcagtttacagaattgctgcacagccttcggcgc
tccaagtcttgcaaaaaagatctctggcaacgcatcaataccatggcgtcatcaagtgct
cccatctga
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