Rhipicephalus microplus (southern cattle tick): 119161436
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Entry
119161436 CDS
T07403
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp04382
Cornified envelope formation
rmp04512
ECM-receptor interaction
rmp04518
Integrin signaling
rmp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119161436
04518 Integrin signaling
119161436
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119161436
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119161436
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rmp04147
]
119161436
00536 Glycosaminoglycan binding proteins [BR:
rmp00536
]
119161436
Exosome [BR:
rmp04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
119161436
Glycosaminoglycan binding proteins [BR:
rmp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119161436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
119161436
NCBI-ProteinID:
XP_037269795
LinkDB
All DBs
Position
2:complement(168423833..168507867)
Genome browser
AA seq
1795 aa
AA seq
DB search
MVASGLTQRLLLLSTLALCFYSALSSNYPAGYRQFYRDPRYNQTGWNNGRGQGGVQRNGY
NGYAAEQRNCSSCSGCRCIGEKGSRGTPGASGPPGPPGVQGHPGPEGLPGDKGEKGEAGR
DGPRGPKGERGKMGMPGFPGINGIPGVPGSPGSRGTPGLDGCNGTKGDPGPVGPLGPHGP
PGDPGPPGPPGPRGEPAYGPPGTKGEKGDPGRNGQVGPPGPPGADGLPGQKGDVGPEGPP
GFRGNDGPVGPKGNMGIGFTGSKGEPGEKGSQGPRGLPGNCSEPSHKVPDSIVGPPGERG
PKGSKGEPGMKGDPGQSGNPGPSGKHGDIGMKGEKGLPGHPGPRGKDGYPGPVGPAGFKG
DRGDEGLPGLKGVSGLRGDPGVPGEPGPRGLPGPPGLPGGSQGMAGPAGPPGPKGAPGLP
GPPGKDGFPGDLGPRGLPGDPGGPGLPGIPGREGPPGPKGDKGDNGLPGLPGLDGPTGYP
GAPGPKGEPGPKGVPGISYPGIKGMDGSNGLDGFPGAKGERGPKGERGAPGDSLEGIPGR
PGPVGPKGDKGYDGLPGTPGTPGTPGSKGEKGGSCSSCVPGAKGEKGERGRDGAPGQAGA
RGHDGIQGAPGERGDDGLPGPPGPPGAEGIPGRPGRDGERGEKGEPAIFDTLVIPPGVGQ
KGEKGVQGLSGPPGFDGRDGPPGPPGLDGMRGLKGEKGFPGVPGSPGQPGVEGRPGPMGQ
KGDAGYGRKGEPGERGPKGQQGFQGMKGEKGLRGPPGPGSLTEPVRGPSGPSGDTGRPGL
DGLQGPKGDAGIPGRDGFPGVKGERGDSGFPGQPGPRGLPGPRGEKGEQGPSGIPGEPGA
KGNPGPPGLDGPPGPIGEPGFPGSGLPGPPGLPGFPGLKGDRGFPGGPGLPGEPGLPGFP
GPKGDTGAPGLPGVLGEKGNKGEPAREGTPGPQGLQGLPGLPGEKGEPGYPGLSGSPGAP
GLPGQKGEAGFPGLPGLPGFDGAPGAPGEPGRDGTIGFPGVPGEKGDKGSPGFPGISGQR
GADGLPGLAGEKGDAGYPGAPGPVGPPGAPGFKGEPGLPGVPGEKGLPGDVSEKGDRGYP
GLPGTPGPVGPPGEPGYDGVSGLKGEPGPPGQGLPGLQGPPGEKGADGFPGVPGTPGEKG
ADGAPGFPGAKGDRGFPGIPGPPGQPGRDGAPGIPGPKGLDGAPGLQGIKGDRGQDGYPG
PTGPAGPVGPTGSPGFPGLDGAPGQKGDRGYPGIPGVKGEKGVKGDEGVPGLPGFPGDKG
NRGYDGVPGLPGEKGDRGAPGLPGLAGLDGERGFPGAPGPQGLPGLPGQGGVGAKGEKGD
VGRPGLDGFPGVPGFKGDAGFPGLPGQRGPPGESPTEGIPGQKGERGYPGPPGLPGQDGY
PGPKGQDGFPGRDGDKGDAGFPGLPGPPGPPGAPGLPGQDGYPGVSGAKGDKGDAGFPGL
PGLVGLKGEPGLPGFAGLDGPPGYPGAQGDRGEPGLVIQGEKGERGLPGPPGLAGPKGNP
GAPGFPGLKGDAGRPGPQGPPGPVGPVGPKGERGLQGTAGLPGLPGAQGQPGNPGLPGLP
GGDYLMGILLVRHSQSATVPTCFNGMTKLWDGYSLLYIEGNEKSHNQDLGYAGSCLRRFS
TMPFLFCDFNSVCNYASRNDKSYWLSTNAPIPMMPVGEDTIRQYISRCVVCEAPANVIAV
HSQSMSIPECPSGGWNQLWIGYSFAMHTAAGAEGGGQSLSSPGSCLEDFRATPFIECNGA
RGTCHYFANKLSFWLSTIEQDFQFERPVSETLKAGKLRNRVSRCAVCIKDSNIGF
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atggtggcctcgggtctaacccaaagattgctgctgctatctacactcgcgctgtgcttc
tatagcgcactgtcttctaattacccggcaggataccggcaattctatcgcgacccacgg
tacaaccaaaccggatggaacaatggccggggccagggcggagtccagcgaaatggttat
aacggctacgctgctgaacagcgaaactgcagctcatgctcgggatgcaggtgtataggg
gaaaaaggatctcggggaacgccgggtgcatccggtcctccaggccctcctggcgtccag
ggacaccctggacccgaaggtctgcctggcgataaaggagaaaaaggagaagctggccgg
gacggaccccgcggccctaagggagaacggggaaaaatgggcatgcctggcttccctgga
attaacggaataccgggcgttccgggatctccgggatctagaggaacacctggccttgat
ggttgcaatggtacaaagggagatcctgggccggtcggtcctcttggaccacacgggccg
cccggtgaccctggcccacctggtccaccaggaccgagaggagagcccgcctatggaccc
cctggaacaaaaggagagaagggtgaccccggacgcaatggtcaagttggacctcccgga
cctccaggagctgatggccttcctggacaaaagggtgacgttggccctgaaggaccaccg
ggtttccgaggaaatgacggaccagtaggacctaaaggaaacatgggcatcggttttact
ggaagcaagggagagcctggtgaaaagggctcccaagggccacgtggattacccgggaac
tgcagcgagccaagtcataaggttcctgacagtattgttggccctcctggcgagagagga
cctaagggcagcaagggtgaacctggtatgaaaggagacccaggacagtctggaaatcca
ggacccagcggaaaacacggtgacattggcatgaaaggagaaaagggtttgccaggccac
cccggtcccaggggcaaagatggctacccaggtcccgtagggccggcaggattcaagggt
gacagaggagatgaaggtcttcctggtttgaaaggcgtaagcggcctgcgaggtgacccc
ggcgtccccggtgaaccaggtcctcgtggtctgccaggaccacctggtcttccaggagga
tctcaaggcatggccggtcccgctggacctcctggtcctaaaggtgcgccaggtctacct
ggtccacccggaaaagatggattccccggtgaccttggtcctcgtggtttaccgggagat
cccggaggacctggcctacccggcataccaggacgcgaaggtccacctggacctaagggt
gacaagggtgacaacggacttccaggcctgcctggtcttgatggcccaacaggctacccg
ggagccccaggtcccaagggtgaacctggtccgaagggcgtccccggcatctcctacccg
ggtatcaaaggcatggatggaagcaatggtcttgatggctttcctggagccaagggagaa
aggggacctaaaggagagcgcggtgcccccggtgactctctggagggaattcctggtcga
cccggtcccgttggacctaagggagataaaggctacgacggattacccggtacacctggc
acacctggaactccaggctccaaaggtgagaagggaggaagttgctcatcctgcgtgccg
ggcgctaagggcgagaaaggtgagcgtggtcgtgatggagcaccgggtcaggctggagcg
agaggccatgatggaattcagggtgcccctggagaacgcggagatgacggcctacccgga
ccaccaggaccacctggcgccgagggtattcccggcaggccaggccgggatggagaacgg
ggagaaaagggtgaaccggcaattttcgacacactagtcatcccgccgggagtaggccag
aaaggagaaaagggcgtacaaggactctcaggacctcccggcttcgacggccgtgatgga
cctccaggacctcccggtcttgacggaatgcgtggactgaagggtgaaaagggtttccct
ggggttcccggaagtcccggccagcctggagttgagggtcggccaggtcctatggggcag
aagggagacgccggatatggtcgcaagggtgaaccgggagagaggggccccaagggacag
caaggcttccaaggaatgaagggcgagaaagggttgcgtggtccaccaggtcctggcagc
ttgacggaaccagtgcgtggaccttctgggccttctggagatacaggtaggcctggcctt
gacggactgcagggaccgaagggtgacgctggcattcctggtcgagacggattcccgggt
gtgaagggagaaaggggagactctggatttcctggacagcctggtcccagaggtctaccg
ggacctcgtggtgagaagggtgagcaggggccttcaggaattcccggagaaccaggagca
aagggcaaccctggaccaccaggtctcgacgggcccccaggacccattggtgagcctggc
ttccccggctctggcctcccaggaccaccaggtctacctggcttccctggactgaaggga
gacaggggattcccaggaggccccggcctgccaggtgaaccaggactgccgggattcccg
ggaccgaagggtgacaccggtgccccaggattgcccggtgtattgggcgaaaagggtaac
aaaggtgaaccagcgagagaaggtacccccggacctcaaggacttcaaggtttgcccgga
ctccctggggagaaaggcgagcccggctaccctggcctatcaggatcacctggtgcacca
ggacttccaggacaaaagggtgaagccggctttcctggccttcccggtctccctggtttt
gatggagcgccaggagcgcctggagagcccggacgtgacggaactattggctttccggga
gtaccaggtgaaaagggtgacaaaggaagtcctggattccctggaatttctggccagcgt
ggtgccgatggactaccgggtctggctggcgaaaaaggcgacgccggctaccccggtgct
cctggacccgtcggtcccccaggagcacctggatttaaaggagaacctggactacccgga
gtgccaggagaaaagggtctacctggagacgtttccgaaaagggagacagaggttacccg
ggtcttcctggaacccctggccctgttggtcccccaggagaaccaggttatgacggagtt
tctggtctaaagggagaacctggaccaccaggccaaggtctgccaggccttcagggcccg
ccaggagagaaaggagctgatgggttcccaggtgtccctggaacaccaggagagaaaggt
gctgatggagcacctggttttcccggtgctaagggagataggggcttccccggtatccca
ggccctccaggtcaacctggacgtgatggcgcaccaggtataccaggaccaaagggattg
gatggtgccccaggcttacaaggcatcaagggagaccgcggacaagatggctatccggga
cctaccggtcccgccggacctgtcggacctaccggatcacctggtttccccggcctagac
ggagcgccaggccaaaagggagaccgtggctaccctggcatccccggcgtaaagggagaa
aagggtgtgaagggagacgaaggtgttcctggccttccaggttttcccggtgacaaagga
aaccgaggatacgatggagttcccggactcccaggtgaaaagggagacagaggggcgccc
ggactgccgggtcttgctggccttgatggagaacgagggttcccaggtgcccccggacct
cagggccttccaggacttccaggacaagggggagtcggtgccaagggtgaaaaaggcgac
gttggtcgacccggcctagatggttttccaggagttccaggttttaagggcgatgcgggt
tttcccggtctacccggtcagagaggacccccaggcgagtcccccactgaaggtattcct
ggacagaagggtgagcgcggctaccccggccctcctggtctgcctggtcaggatggttac
ccaggtcccaagggccaagatggtttcccgggccgtgacggtgataagggagatgccggc
ttcccaggccttcccggacccccgggaccacctggagcaccaggacttcccggccaagat
ggataccctggcgtttctggagcaaagggtgacaagggtgacgccggattcccgggtctt
ccaggattggttggcctcaagggagaacccggtcttcctggattcgctggtttggacggt
ccccccgggtaccctggtgctcagggagacagaggagaaccaggccttgtaatacaaggt
gaaaagggtgagcgcggactaccaggtcctccggggctagcaggacctaagggcaaccca
ggagctccaggtttcccagggctcaagggagatgctggtcgaccaggtccacaagggcct
ccaggaccagtgggtcctgtgggaccaaagggagaacgtggtcttcaaggtactgcaggt
ctgccaggtctgccgggagcacaaggtcaaccaggcaatccgggtctgccagggctaccc
ggtggcgactatctcatgggaatcttgctggttcgccacagccagtcggccaccgtgccg
acctgcttcaatggcatgaccaagctgtgggatggctactcgctcctatacatcgaaggc
aacgagaagtcccacaaccaagatctcggttacgccggctcttgcctgagaagatttagc
acgatgccgttcctgttttgtgacttcaacagcgtgtgcaattacgcaagccgtaacgac
aagtcgtactggctttcaacgaacgccccgataccaatgatgcccgtcggagaagacacc
attaggcagtacatcagtcgatgcgtggtctgcgaagccccagccaatgtcatagcagtc
cacagccagtccatgtcaatacccgagtgtccatctggaggatggaaccagttgtggatc
ggttacagttttgccatgcacacggccgccggcgccgaaggaggtggtcagtcactttcc
agtcccggatcctgcctcgaggacttcagggccacaccgttcattgagtgtaacggtgcg
cgtggcacgtgccattacttcgccaataagctcagcttctggctttccactatcgaacag
gacttccagttcgaacggcctgtcagtgaaacgctcaaggctggcaagcttcgcaaccgt
gttagtcgctgtgctgtatgcatcaaggactcaaacatcggcttctag
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