Rhipicephalus microplus (southern cattle tick): 119161436
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Entry
119161436 CDS
T07403
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp04512
ECM-receptor interaction
rmp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119161436
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119161436
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rmp04147
]
119161436
00536 Glycosaminoglycan binding proteins [BR:
rmp00536
]
119161436
Exosome [BR:
rmp04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
119161436
Glycosaminoglycan binding proteins [BR:
rmp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119161436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
119161436
NCBI-ProteinID:
XP_037269795
LinkDB
All DBs
Position
2:complement(168423833..168507867)
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AA seq
1795 aa
AA seq
DB search
MVASGLTQRLLLLSTLALCFYSALSSNYPAGYRQFYRDPRYNQTGWNNGRGQGGVQRNGY
NGYAAEQRNCSSCSGCRCIGEKGSRGTPGASGPPGPPGVQGHPGPEGLPGDKGEKGEAGR
DGPRGPKGERGKMGMPGFPGINGIPGVPGSPGSRGTPGLDGCNGTKGDPGPVGPLGPHGP
PGDPGPPGPPGPRGEPAYGPPGTKGEKGDPGRNGQVGPPGPPGADGLPGQKGDVGPEGPP
GFRGNDGPVGPKGNMGIGFTGSKGEPGEKGSQGPRGLPGNCSEPSHKVPDSIVGPPGERG
PKGSKGEPGMKGDPGQSGNPGPSGKHGDIGMKGEKGLPGHPGPRGKDGYPGPVGPAGFKG
DRGDEGLPGLKGVSGLRGDPGVPGEPGPRGLPGPPGLPGGSQGMAGPAGPPGPKGAPGLP
GPPGKDGFPGDLGPRGLPGDPGGPGLPGIPGREGPPGPKGDKGDNGLPGLPGLDGPTGYP
GAPGPKGEPGPKGVPGISYPGIKGMDGSNGLDGFPGAKGERGPKGERGAPGDSLEGIPGR
PGPVGPKGDKGYDGLPGTPGTPGTPGSKGEKGGSCSSCVPGAKGEKGERGRDGAPGQAGA
RGHDGIQGAPGERGDDGLPGPPGPPGAEGIPGRPGRDGERGEKGEPAIFDTLVIPPGVGQ
KGEKGVQGLSGPPGFDGRDGPPGPPGLDGMRGLKGEKGFPGVPGSPGQPGVEGRPGPMGQ
KGDAGYGRKGEPGERGPKGQQGFQGMKGEKGLRGPPGPGSLTEPVRGPSGPSGDTGRPGL
DGLQGPKGDAGIPGRDGFPGVKGERGDSGFPGQPGPRGLPGPRGEKGEQGPSGIPGEPGA
KGNPGPPGLDGPPGPIGEPGFPGSGLPGPPGLPGFPGLKGDRGFPGGPGLPGEPGLPGFP
GPKGDTGAPGLPGVLGEKGNKGEPAREGTPGPQGLQGLPGLPGEKGEPGYPGLSGSPGAP
GLPGQKGEAGFPGLPGLPGFDGAPGAPGEPGRDGTIGFPGVPGEKGDKGSPGFPGISGQR
GADGLPGLAGEKGDAGYPGAPGPVGPPGAPGFKGEPGLPGVPGEKGLPGDVSEKGDRGYP
GLPGTPGPVGPPGEPGYDGVSGLKGEPGPPGQGLPGLQGPPGEKGADGFPGVPGTPGEKG
ADGAPGFPGAKGDRGFPGIPGPPGQPGRDGAPGIPGPKGLDGAPGLQGIKGDRGQDGYPG
PTGPAGPVGPTGSPGFPGLDGAPGQKGDRGYPGIPGVKGEKGVKGDEGVPGLPGFPGDKG
NRGYDGVPGLPGEKGDRGAPGLPGLAGLDGERGFPGAPGPQGLPGLPGQGGVGAKGEKGD
VGRPGLDGFPGVPGFKGDAGFPGLPGQRGPPGESPTEGIPGQKGERGYPGPPGLPGQDGY
PGPKGQDGFPGRDGDKGDAGFPGLPGPPGPPGAPGLPGQDGYPGVSGAKGDKGDAGFPGL
PGLVGLKGEPGLPGFAGLDGPPGYPGAQGDRGEPGLVIQGEKGERGLPGPPGLAGPKGNP
GAPGFPGLKGDAGRPGPQGPPGPVGPVGPKGERGLQGTAGLPGLPGAQGQPGNPGLPGLP
GGDYLMGILLVRHSQSATVPTCFNGMTKLWDGYSLLYIEGNEKSHNQDLGYAGSCLRRFS
TMPFLFCDFNSVCNYASRNDKSYWLSTNAPIPMMPVGEDTIRQYISRCVVCEAPANVIAV
HSQSMSIPECPSGGWNQLWIGYSFAMHTAAGAEGGGQSLSSPGSCLEDFRATPFIECNGA
RGTCHYFANKLSFWLSTIEQDFQFERPVSETLKAGKLRNRVSRCAVCIKDSNIGF
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atggtggcctcgggtctaacccaaagattgctgctgctatctacactcgcgctgtgcttc
tatagcgcactgtcttctaattacccggcaggataccggcaattctatcgcgacccacgg
tacaaccaaaccggatggaacaatggccggggccagggcggagtccagcgaaatggttat
aacggctacgctgctgaacagcgaaactgcagctcatgctcgggatgcaggtgtataggg
gaaaaaggatctcggggaacgccgggtgcatccggtcctccaggccctcctggcgtccag
ggacaccctggacccgaaggtctgcctggcgataaaggagaaaaaggagaagctggccgg
gacggaccccgcggccctaagggagaacggggaaaaatgggcatgcctggcttccctgga
attaacggaataccgggcgttccgggatctccgggatctagaggaacacctggccttgat
ggttgcaatggtacaaagggagatcctgggccggtcggtcctcttggaccacacgggccg
cccggtgaccctggcccacctggtccaccaggaccgagaggagagcccgcctatggaccc
cctggaacaaaaggagagaagggtgaccccggacgcaatggtcaagttggacctcccgga
cctccaggagctgatggccttcctggacaaaagggtgacgttggccctgaaggaccaccg
ggtttccgaggaaatgacggaccagtaggacctaaaggaaacatgggcatcggttttact
ggaagcaagggagagcctggtgaaaagggctcccaagggccacgtggattacccgggaac
tgcagcgagccaagtcataaggttcctgacagtattgttggccctcctggcgagagagga
cctaagggcagcaagggtgaacctggtatgaaaggagacccaggacagtctggaaatcca
ggacccagcggaaaacacggtgacattggcatgaaaggagaaaagggtttgccaggccac
cccggtcccaggggcaaagatggctacccaggtcccgtagggccggcaggattcaagggt
gacagaggagatgaaggtcttcctggtttgaaaggcgtaagcggcctgcgaggtgacccc
ggcgtccccggtgaaccaggtcctcgtggtctgccaggaccacctggtcttccaggagga
tctcaaggcatggccggtcccgctggacctcctggtcctaaaggtgcgccaggtctacct
ggtccacccggaaaagatggattccccggtgaccttggtcctcgtggtttaccgggagat
cccggaggacctggcctacccggcataccaggacgcgaaggtccacctggacctaagggt
gacaagggtgacaacggacttccaggcctgcctggtcttgatggcccaacaggctacccg
ggagccccaggtcccaagggtgaacctggtccgaagggcgtccccggcatctcctacccg
ggtatcaaaggcatggatggaagcaatggtcttgatggctttcctggagccaagggagaa
aggggacctaaaggagagcgcggtgcccccggtgactctctggagggaattcctggtcga
cccggtcccgttggacctaagggagataaaggctacgacggattacccggtacacctggc
acacctggaactccaggctccaaaggtgagaagggaggaagttgctcatcctgcgtgccg
ggcgctaagggcgagaaaggtgagcgtggtcgtgatggagcaccgggtcaggctggagcg
agaggccatgatggaattcagggtgcccctggagaacgcggagatgacggcctacccgga
ccaccaggaccacctggcgccgagggtattcccggcaggccaggccgggatggagaacgg
ggagaaaagggtgaaccggcaattttcgacacactagtcatcccgccgggagtaggccag
aaaggagaaaagggcgtacaaggactctcaggacctcccggcttcgacggccgtgatgga
cctccaggacctcccggtcttgacggaatgcgtggactgaagggtgaaaagggtttccct
ggggttcccggaagtcccggccagcctggagttgagggtcggccaggtcctatggggcag
aagggagacgccggatatggtcgcaagggtgaaccgggagagaggggccccaagggacag
caaggcttccaaggaatgaagggcgagaaagggttgcgtggtccaccaggtcctggcagc
ttgacggaaccagtgcgtggaccttctgggccttctggagatacaggtaggcctggcctt
gacggactgcagggaccgaagggtgacgctggcattcctggtcgagacggattcccgggt
gtgaagggagaaaggggagactctggatttcctggacagcctggtcccagaggtctaccg
ggacctcgtggtgagaagggtgagcaggggccttcaggaattcccggagaaccaggagca
aagggcaaccctggaccaccaggtctcgacgggcccccaggacccattggtgagcctggc
ttccccggctctggcctcccaggaccaccaggtctacctggcttccctggactgaaggga
gacaggggattcccaggaggccccggcctgccaggtgaaccaggactgccgggattcccg
ggaccgaagggtgacaccggtgccccaggattgcccggtgtattgggcgaaaagggtaac
aaaggtgaaccagcgagagaaggtacccccggacctcaaggacttcaaggtttgcccgga
ctccctggggagaaaggcgagcccggctaccctggcctatcaggatcacctggtgcacca
ggacttccaggacaaaagggtgaagccggctttcctggccttcccggtctccctggtttt
gatggagcgccaggagcgcctggagagcccggacgtgacggaactattggctttccggga
gtaccaggtgaaaagggtgacaaaggaagtcctggattccctggaatttctggccagcgt
ggtgccgatggactaccgggtctggctggcgaaaaaggcgacgccggctaccccggtgct
cctggacccgtcggtcccccaggagcacctggatttaaaggagaacctggactacccgga
gtgccaggagaaaagggtctacctggagacgtttccgaaaagggagacagaggttacccg
ggtcttcctggaacccctggccctgttggtcccccaggagaaccaggttatgacggagtt
tctggtctaaagggagaacctggaccaccaggccaaggtctgccaggccttcagggcccg
ccaggagagaaaggagctgatgggttcccaggtgtccctggaacaccaggagagaaaggt
gctgatggagcacctggttttcccggtgctaagggagataggggcttccccggtatccca
ggccctccaggtcaacctggacgtgatggcgcaccaggtataccaggaccaaagggattg
gatggtgccccaggcttacaaggcatcaagggagaccgcggacaagatggctatccggga
cctaccggtcccgccggacctgtcggacctaccggatcacctggtttccccggcctagac
ggagcgccaggccaaaagggagaccgtggctaccctggcatccccggcgtaaagggagaa
aagggtgtgaagggagacgaaggtgttcctggccttccaggttttcccggtgacaaagga
aaccgaggatacgatggagttcccggactcccaggtgaaaagggagacagaggggcgccc
ggactgccgggtcttgctggccttgatggagaacgagggttcccaggtgcccccggacct
cagggccttccaggacttccaggacaagggggagtcggtgccaagggtgaaaaaggcgac
gttggtcgacccggcctagatggttttccaggagttccaggttttaagggcgatgcgggt
tttcccggtctacccggtcagagaggacccccaggcgagtcccccactgaaggtattcct
ggacagaagggtgagcgcggctaccccggccctcctggtctgcctggtcaggatggttac
ccaggtcccaagggccaagatggtttcccgggccgtgacggtgataagggagatgccggc
ttcccaggccttcccggacccccgggaccacctggagcaccaggacttcccggccaagat
ggataccctggcgtttctggagcaaagggtgacaagggtgacgccggattcccgggtctt
ccaggattggttggcctcaagggagaacccggtcttcctggattcgctggtttggacggt
ccccccgggtaccctggtgctcagggagacagaggagaaccaggccttgtaatacaaggt
gaaaagggtgagcgcggactaccaggtcctccggggctagcaggacctaagggcaaccca
ggagctccaggtttcccagggctcaagggagatgctggtcgaccaggtccacaagggcct
ccaggaccagtgggtcctgtgggaccaaagggagaacgtggtcttcaaggtactgcaggt
ctgccaggtctgccgggagcacaaggtcaaccaggcaatccgggtctgccagggctaccc
ggtggcgactatctcatgggaatcttgctggttcgccacagccagtcggccaccgtgccg
acctgcttcaatggcatgaccaagctgtgggatggctactcgctcctatacatcgaaggc
aacgagaagtcccacaaccaagatctcggttacgccggctcttgcctgagaagatttagc
acgatgccgttcctgttttgtgacttcaacagcgtgtgcaattacgcaagccgtaacgac
aagtcgtactggctttcaacgaacgccccgataccaatgatgcccgtcggagaagacacc
attaggcagtacatcagtcgatgcgtggtctgcgaagccccagccaatgtcatagcagtc
cacagccagtccatgtcaatacccgagtgtccatctggaggatggaaccagttgtggatc
ggttacagttttgccatgcacacggccgccggcgccgaaggaggtggtcagtcactttcc
agtcccggatcctgcctcgaggacttcagggccacaccgttcattgagtgtaacggtgcg
cgtggcacgtgccattacttcgccaataagctcagcttctggctttccactatcgaacag
gacttccagttcgaacggcctgtcagtgaaacgctcaaggctggcaagcttcgcaaccgt
gttagtcgctgtgctgtatgcatcaaggactcaaacatcggcttctag
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