Rhipicephalus microplus (southern cattle tick): 119163230
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Entry
119163230 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 6-like
KO
K22804
structural maintenance of chromosomes protein 6
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmp03400
]
119163230
DNA repair and recombination proteins [BR:
rmp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
119163230
BRITE hierarchy
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GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
SMC_hinge
AAA_29
DEAD
Motif
Other DBs
NCBI-GeneID:
119163230
NCBI-ProteinID:
XP_037271083
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Position
3:76920728..77036613
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AA seq
1093 aa
AA seq
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MSKRSNRAVDHDPDEETVSSNTKRLRNGVADSLLSPSQTVAQLDRTVGIIESVHLKNFMC
HSKLDFKFSEQTNFIIGRNGSGKSAILTSLIVGLGGKANTASRGTSVKSLVETGKRAAEV
TIRLQNKGNEAFKHDEYGDSILITRRLTVDGSSQYKIKSCNGAVXSTKKEELTRIMDHFN
IQIDNPVMILNQETSRNFLQSKSARDKFNFFMKATQLEKLQATYSKIDEERAATDRELTL
KEKLLPELERDVKRLEKLWRAFENLEDQRVKLQRLKAEVLWARVKEKEDVMLQTEAAYQK
EDRALSKLEEKIAEVDQKIEAHTKLQQDLQAKLNEALERVQAMQPAMMSGRKEYTIKKEQ
MREKEQAIARVDRELAGKRKEAEALKSRIKELCTLDTGKQAEERAQREAQIRDLETRKEE
LRSHLRTSEHHCEQVKSSADECLAKLNAIKAELRELNDNIRVLSSSIQNLQASKKNSLQR
FGRHMPTLLREIDIAVSKGRFKKHPKGPLGSLIKLKDQRWDLATECCLGGALFAFLVDND
HDARTLRQIMAKVMGAERKPTIITSSFMGTVYNYKHKAMRSSRYVNLLDNLEIEDPDVIN
CLIDQKGLEKIALIDTNHEARNVMSNTATVPTNCSEAFTALGDQLFPSPEFRYYSSSKQR
AELLKENVEDQIREKKSELADTKRRLNEVEAMFADAQAELQQSRKEAGRLTAQLDSMRRE
EVKLSSQIRELATVEEPEPTNVSILEKMLQKVEGEISGIQEELMALKEQQMELRATLKAE
AAKLREIEEGRTELLKESNDIKTKLLDADASLQKDKSQMQGLEEQKKAVEQSQLASERQL
KTFSQQLKELTEKALEVSSERISSRRKPAAITAEIEALESQLQVEERRKGNKDEIAKQYE
SSVAKYANVKDRVQELRAFVSELEEMLNVRHDRYAEICRQTVMRLRLVFGTTLLQQNFKG
TLDIDHNKQHLTIRVEPKEGVSGDNVHQDLKALSGGERSFSTVCFMLALWEAMECPFSIM
DEFDIFMDMGKRRVSLEMILEMTRRKSANQFVFLTPLELPAIDALQHVNIMVMPEPSRKR
PAVAAARNDADDE
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgatcgaacagggctgttgatcacgacccggatgaagagacggtctcatcc
aataccaagaggctcagaaatggtgtcgcggattcattgctgagcccgtcgcagactgtg
gcacagctggatcgtaccgtcggcataatagagtccgtgcacttgaagaacttcatgtgc
catagcaagttggacttcaagttctccgagcagacaaacttcatcatcgggaggaatgga
agtgggaagagtgctatcctcacatctctgattgttggccttggtggaaaggccaatact
gcttcgcgtggaaccagtgtcaagagcctggtggaaaccggcaaacgcgcggcagaggtg
actatcagacttcagaacaaaggtaatgaggccttcaagcacgacgaatatggagactcc
atattgattaccaggagattaacagttgacggctcgtcccagtacaagatcaagtcctgc
aacggtgctgtgnattcgaccaagaaagaggaactgactcgcattatggaccacttcaac
attcagattgacaatcctgtgatgatcttgaaccaggaaacaagccggaatttcctacag
agcaagagtgcacgagacaagttcaatttcttcatgaaggccacacagcttgaaaagctc
caggccacgtacagcaagattgatgaagaaagggcggcgacggaccgagagctcactctg
aaagaaaagctgctaccagagctggaacgggacgtgaagcggcttgaaaagctttggcga
gcgtttgagaacttggaggaccaaagggtgaagctgcagcggctgaaagccgaggtgctt
tgggctagggtcaaggaaaaagaagacgtgatgctgcagactgaagccgcttaccagaag
gaagacagggcactctcgaagctggaggagaaaattgccgaagttgatcaaaagatcgaa
gcacacaccaagctgcagcaggatcttcaggccaagctgaacgaggctctcgagcgcgtc
caggcgatgcagccggccatgatgtctggccgcaaggagtacaccatcaagaaggagcaa
atgcgcgagaaggagcaggcgattgcgcgggttgatcgggagcttgcagggaagcgcaag
gaagccgaggccttgaagagccggataaaggagctgtgcacattggacaccggcaagcag
gccgaagaaagggcacagcgcgaggcccagatccgggatctggagacaaggaaggaagaa
cttcgatcgcacctccgcacctctgagcaccactgcgagcaggtcaagtcgtcggcggac
gagtgcttagcgaagctgaatgccatcaaggctgagctacgtgagctcaacgacaatatt
cgagtcctgtccagctccatccagaacttgcaggccagcaagaagaacagcctgcagcgc
tttggccgccatatgcccacgttactgcgtgaaatagatatcgccgtgtccaagggaagg
ttcaagaaacaccccaagggacccctcgggtcactgataaagctgaaggatcagcgatgg
gacctggccacagagtgctgcctcggaggcgccttgttcgctttcttggtggacaacgac
cacgatgccaggaccctgcggcagatcatggcgaaagtcatgggtgccgagcgcaagccg
accatcatcactagttccttcatgggaaccgtttacaactacaagcacaaagcaatgcgc
tcgtcgaggtatgtaaacctcttggataacctcgaaattgaagatccggacgtgatcaac
tgcctcatcgatcagaaagggctggaaaagattgctctcatcgacaccaaccacgaggcc
cgaaacgtgatgagcaacactgccaccgtccctacaaactgctctgaggccttcacggca
ctgggcgatcagctgttcccgtcacccgagttccgttactactcatcgtcgaagcagcgg
gccgaactgctcaaggaaaacgtggaggatcagattcgggaaaagaaatcagagcttgcc
gacacaaagagacggttgaacgaagtggaggccatgttcgctgacgctcaagctgaactg
cagcagagtcggaaggaggctggccgcctgactgcccagttggactcgatgaggcgtgaa
gaggtcaagctgtcttcccagattcgagagcttgcgaccgttgaagagcccgagccaaca
aatgtttccattctggagaaaatgctgcaaaaggtggaaggcgagataagtggcattcag
gaggagctcatggctctcaaggaacagcagatggaacttcgcgcgacgctgaaggcggag
gcagctaagctccgggaaatcgaggaaggccggacagagctgctcaaagagagcaacgac
atcaagacaaagttgctcgatgcggacgcgtcgttgcagaaggataaaagccagatgcaa
ggcctcgaagaacaaaagaaggccgtcgaacagagtcagttggcctcggagaggcagctg
aagactttcagccaacaacttaaagaactgacagagaaggcgctcgaagtttcgtctgag
cgtatctcgtctcgaaggaagccggccgccattacggcagaaattgaagctctagagagc
cagttgcaagtggaagaaaggaggaagggcaacaaggacgaaatagccaaacagtacgag
tcatccgtcgcgaagtacgcaaacgtcaaggacagagttcaggagctacgagcgtttgtg
tcggaactcgaggaaatgttgaacgttcgacatgacaggtacgcagagatttgccgtcag
acagtgatgcgtctgcgcctcgtctttggaacaacattgctgcaacagaacttcaagggg
accctggatattgatcacaacaagcagcaccttacaatcagggtggagcccaaggaaggt
gtgagtggagacaacgttcaccaggacctgaaagccttgtcaggtggggagcgctccttc
tcgaccgtctgctttatgcttgccctttgggaagctatggagtgtccgttcagcatcatg
gatgagttcgacatcttcatggatatgggaaagaggagggtgagcctcgagatgattctc
gagatgactaggaggaaatctgccaaccagtttgtgttcctcactccactcgagttgccc
gccatcgatgctctccagcacgtgaacatcatggtaatgccggagccaagccgcaagcgc
ccggctgtggcggcagcccgaaacgacgccgacgatgaatag
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