Rhipicephalus microplus (southern cattle tick): 119163246
Help
Entry
119163246 CDS
T07403
Symbol
Atg17
Name
(RefSeq) autophagy-related 17 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119163246 (Atg17)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rmp01009
]
119163246 (Atg17)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rmp04131
]
119163246 (Atg17)
03029 Mitochondrial biogenesis [BR:
rmp03029
]
119163246 (Atg17)
Protein phosphatases and associated proteins [BR:
rmp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119163246 (Atg17)
Membrane trafficking [BR:
rmp04131
]
Autophagy
Autophagosome formation proteins
ULK complex
119163246 (Atg17)
Mitochondrial biogenesis [BR:
rmp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
119163246 (Atg17)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
ubiquitin
DUF6158
TBK1_ULD
DUF5113
XLF_CC
Motif
Other DBs
NCBI-GeneID:
119163246
NCBI-ProteinID:
XP_037271100
LinkDB
All DBs
Position
9:72030836..72120426
Genome browser
AA seq
1226 aa
AA seq
DB search
MLYVFLVDTGKMVTFDMNHAVESVEHLKAVIHQRFSVPPEKQVLLISGGESLQPTASVGS
YSAGTDTNPIYFFNKVSIESESLAKSSELATSDQDVTLEVEAVMNLPPAFDTVVVRTQLA
QELCDRARQELKISEALVHEQHLQQQGWAAVVANLDDMTRSLKNNAAGIEQELTEFLSSH
QQHMELLESVEEDIVLLGKIPVLPALLSAEQQDEQRGMMLLDWINSTDSKSSLKEMASSC
KVCLKQLVAEGLEKCRTDLQKVMILVDNQDMLQIRGVEEWLTNLDELLDRARKLVQHQQD
YQQAFLLNQSSFSRSKDSSVLPDLCESHVKQLRIMLEHHEDLRDIRSRCVAAKDKLCSNL
KERLRWVIYVQKIISEMQVRMMYTIATTRQLRRQLEICRQIHMAPHTYLRAVTEVIRRRH
FSDNFLQWAGMLSSQCQRLHHMEVQARKDFNSHFSKHFLHALFPGMDDLPPPFATRNPKS
FDDNLPLLSAEDLEVLRKALPEMSELLQTPDPVQLPTVVLQSSVAMQSCGDDTSQSEVKA
SSSFSPRHASCQELPPEEAKYQTEELMKSTSSEKDCHDGACPEDRELTPKLVVSDDEFEE
VADEPSPGLKADAADLLGMPVPQEAILCSPDSLGHTSNDFQTADFYIDESMPSSISDSNG
IVPVAPSPVPPSSAAPAQQAHVAAELQRQLDERNTALLAVQEELERERIKRQELRCAVTN
VCEAAAAVCADSRSTTASIRDDLAAALQMVSNDASAIGAAMDTALQALLDKLENDKAASI
ATEVDRVRREFESAEEDHRHQLEVERQKFEDAQREVHMYQQQLQQLMQVADSLRTDSALA
LASLKNTMQQEHESAIAKATLEHELEQEALNERLRAFERSHEEEVQDLNEVICEKDRQIH
MLFQDRQGLEEQLHTRFSLEKEELLAQCRQECAQREQAIREELIALHEERLDQIQHCHEE
AIQKAKEQTRLELQQEWESRMPGFKLLQMRESMKDLDTAAGDSCSLEEAKLDPSGDSMME
STVKLPHSADPMLLELRSQLLEKQNEVNRLQQQVMAMSDNFGTQLQPSPIDKVSILSCQP
GDVVLLCYDEGHQNYVLFVLGPNLHFLHTDCLDTLGLKTAPGTVRKGWVLAEVVEKEFCQ
ARKPQNRYHVPAGTRFYRVKAKPWDKEAAVRREQQRRSSLRSLTQSSLITATSTAAAIEE
GPLPPPPGLPEGSSAGGEPYVQPLDS
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgctgtacgtcttcctcgtcgatactggcaagatggtgacctttgatatgaaccacgcc
gtcgaaagcgtggagcatctcaaagctgtcattcatcagcggttcagtgtgccacccgaa
aaacaagtgctgctcataagcggaggggaaagcctgcagccgacagcctctgtgggcagc
tacagcgcgggcacggacaccaaccccatttacttcttcaacaaggtttccattgaatcc
gaaagccttgccaagtccagtgagctcgccacgtcagaccaggatgtgacgcttgaagta
gaagcggtgatgaacctgccgcccgcattcgacactgtggttgtgaggacgcagcttgct
caggaactctgtgaccgtgctcggcaggaactgaaaatatctgaggcccttgtccacgaa
cagcacttgcagcagcagggctgggctgctgtggttgccaacctcgatgatatgacaagg
agcctgaagaacaacgcagcaggcatcgaacaggagctgacagagttcctcagcagtcac
cagcagcacatggaactgctcgagagtgtggaagaagatattgtgctgctaggaaaaatt
cccgttcttcctgccctgctgtcggctgagcagcaggacgaacagagaggcatgatgctg
ctagactggatcaactcgacggatagcaaaagcagcttgaaggagatggccagcagctgc
aaggtgtgcctaaagcagcttgttgcagaaggcctggagaagtgccgcacggatttgcag
aaagtgatgatactggtggacaatcaggacatgctgcagattcgcggtgtcgaagagtgg
ctgacgaacctcgacgagctcttggacagagccaggaagctggtgcagcatcagcaggat
taccagcaggcgttcctgctcaaccagtcgagcttctcccgctccaaggattccagcgtc
ctgccagacctgtgcgagagccacgtaaagcagctcagaatcatgttggagcaccacgag
gacctgcgtgacattcgatcccgctgtgtcgctgcgaaggacaaactctgcagcaacctc
aaggaacgtctgcggtgggttatttatgtacagaagataatatctgagatgcaagtgcgc
atgatgtacaccatagcgaccaccaggcagctgcgcaggcagctcgagatatgtcgccag
atccacatggccccgcacacctacctccgtgcagtcaccgaggtcatccggcgacgccac
ttctctgacaatttcttgcagtgggcaggcatgctgtcatcgcagtgccaacggctgcac
cacatggaagtgcaggcccggaaggacttcaacagccacttctccaagcacttccttcac
gcgctcttccctggcatggacgacttgcctccaccttttgcgactcggaatcccaagtca
tttgatgacaatctgcctctcttgtccgccgaagatctggaggtccttcggaaagcgctt
ccagagatgtctgaactgcttcaaactcccgatccagttcagctgcccaccgtcgtgctg
cagtcgtcggttgccatgcagtcctgcggagacgacacgtcgcaatctgaagtgaaggct
tcgtcgtctttcagtccaaggcacgcttcctgtcaggagctgccgccggaggaagccaag
taccaaaccgaggagctaatgaagagtacctcctctgaaaaggactgccacgacggtgct
tgtcctgaagatcgcgagctcaccccgaagctggtggtgtccgatgatgagttcgaagaa
gttgcagacgaaccttctccgggcctcaaggctgacgcagcagacttactgggcatgccc
gttcctcaggaagcaatcctctgctccccagactccctggggcacacctcaaatgatttc
cagacagcagatttttacattgacgagtcgatgccatcgtcgatatcggacagcaacgga
atcgtgcctgttgcacccagtcctgttccaccttcatcagcagcgcctgcccaacaggct
cacgtggccgccgaacttcagcggcagctagacgagcgaaatacggcgctgctagccgtt
caggaggagctcgaaagggaaagaatcaagaggcaagaactgaggtgtgccgtgacaaat
gtgtgtgaagccgcagcggcagtgtgcgcagactctcgctcgaccaccgcctcgattcgc
gacgacctggcagctgcactccagatggtgagcaacgatgcatcggccatcggggccgcc
atggacactgcccttcaggccctgctagacaagcttgagaatgacaaggccgcgtccata
gcaaccgaggtggacagggtgcggcgggagtttgagtcggcggaggaagaccaccggcac
cagctggaggtggagcggcagaaattcgaggacgcgcagcgcgaggtgcatatgtaccag
cagcagctccaacagctcatgcaggtcgccgacagcctgcgcactgactcggcacttgcc
cttgcctcgttgaagaacaccatgcagcaggagcacgagtctgccattgccaaagccacg
cttgagcacgagctcgaacaggaggccctgaacgagcggctgcgtgcgttcgagaggagc
catgaggaggaagtccaagatctcaatgaagtaatctgcgagaaggaccggcagatccat
atgctgttccaggacaggcagggcttggaggagcagttgcacactcgcttctccctggag
aaagaagagctgctcgcacagtgccgccaggagtgcgcccagagagagcaggccatccgg
gaagagctcatcgccctgcacgaggagcggctcgaccagattcaacactgccacgaagaa
gcgatccaaaaggccaaagaacagacgaggctagagcttcagcaggagtgggaaagcagg
atgccaggcttcaagctcctgcagatgagggagtccatgaaagacttggacacagctgcg
ggtgactcctgctcacttgaggaggcgaaactcgacccatctggggacagcatgatggag
tccactgtgaagcttccccactcggctgaccccatgctgctggagttaaggagtcaattg
cttgagaagcaaaatgaagtcaatagactgcagcaacaagttatggccatgtccgacaac
tttggcactcagcttcaaccatcccccatcgacaaggtctccatcctctcttgccagcca
ggtgacgtcgtgctactctgctacgacgaaggtcaccaaaactacgtcctcttcgtgcta
ggaccgaacttgcacttcctgcacactgactgcctcgacacgctcggccttaagacagca
cctggcacagttcgcaaaggttgggtcctggctgaggtggtcgagaaagaattctgccaa
gctcgcaagccgcagaaccgataccatgtgcccgccggtacccgcttttaccgggtcaag
gcgaagccgtgggacaaagaggctgccgtgcgacgtgaacagcagcggcggtcgtcgctg
cgcagtctcactcagtcgtcactcatcactgccacctccaccgccgccgccattgaggag
gggcccctgcctccgccacccggactgccagagggctcctccgccggaggagagccctat
gtccagcccctcgattcctaa
DBGET
integrated database retrieval system
