Rhipicephalus microplus (southern cattle tick): 119163525
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Entry
119163525 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1-like
KO
K06243
laminin, beta 2
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119163525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
F5_F8_type_C
Pup
LAMB1
Motif
Other DBs
NCBI-GeneID:
119163525
NCBI-ProteinID:
XP_037271429
LinkDB
All DBs
Position
3:106860813..106908647
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AA seq
1793 aa
AA seq
DB search
MSFHKPSWTMASSIHVLFIVSLLVIISHAQRSRPNDRQSQYTRQYAVQSRGSQPHACEES
SCYPATGNLLIGREDKLSATSTCGLRGVETYCIVSHLKEKTKCFRCDSTQRGRDYHGIDN
IVSRIGKKSKGSWWQSENGVQSVSIRLDLEAEFHFTHLIITFKTFRPAAMLIERSHDNGH
TWKVYQYFAYDCQESFPTVRYGPRRNITDVTCESHYSGVEPSTNGEVIFRVLPPHIHIDN
PHSPDVQDLLKMTNLRINFTKLHTLGDNLLDSRREIKQKYYYAVYDMVVRGSCSCYGHAS
RCIPEEGESYAARDDMVFGKCQCTHNTKGLNCESCEDLYNDQPWRPASERDPNPCKPCNC
NGHANKCHFDAAVWERSGRVSGGVCDDCQDNTMGLNCEQCVPFYFKDPQRDISDPYACQP
CDCDPRGSLDEGVCDPQDDPTSGLVAGRCHCKKNVESRRCDRCKKGFFNFQAANPDGCEP
CSCHELGTAGDGCNVYTGECTCKRNVIGRDCNQCLPEYYGLSHDDDGCKPCDCDPGGAYE
NSCDVISGQCRCRPSVQGRRCDQPDTGFFVGNLDFMVHEAELAKGSPDCQVLIREPYADR
DASWTGLGFMQVHQDSYLEFDVPDIPTSMDYNIVFRYEPKLAQGWEEAIVTVDRPGPVDP
NGPCANAIPQDDRQVIRFSPGDRYVVVAPPVCLEKGRHYKVRVTFKQYDREVDTPSASIL
IDSMVLMPDINAIPFFHGTPANEYRREEFERFRCGQAFYAVRRGGTLPEICKKYLYSIGF
YVFQGAQDCRCDPQGSHSSVCNTLGGQCQCKANVVGRSCDRCAPGTYGFGPGGCRPCDCN
GIGSLDNFCDAQTGQCKCRPNTYGRQCDECQPGYWNYPNCQRCDCNGHADTCDSRTGHCI
QCRDFTSGPHCDRCEVGFYGDPRYGVDIPCRPCPCPGTADSGINHATSCDLDQRTGNVIC
HCAQGYVGERCDRCANNYYGEPNVPGGSCRRCECSGNVDETQPGNCDSRTGVCLRCLYNT
EGPHCERCKPGHFGNASLQQCYECVCNLLGLDPNQGYCDPVTGQCPCLPNVEGIACDRCA
PNYWKIASGEGCEACGCDPLGSYDLKCNEFDGQCPCKPGHGGRQCNQCQDNHWGDPRVRC
YQCECNVPGAATSQCHRNNGSCVCIPGVAGERCEQCARGFTGRAPYCDSCGECFDNWDRI
IQELREETHNMINSARQIKQQGTTGVYTREFQEMEEKLHEVEEILNGANITGLDLLDRQS
LIEEIRRNLTESQMQLEEIGDRSGNVTQRSFATNLMLASLHEQAQELGRKAKELRENTTA
LQEANVEGALNITREAQKRSQMAEGRVRGAQDDIGKSQAARRYLERKLQDTASQYNRTYQ
ENENALRKLQQEVADLEDQISDVNELVCYRRGTVDRCDALCGGAGCNHCGGLGCEEGALT
RANNTLAMAVDANQILGKKEAEARDLFNSVGSAEKESQRALEEAKKAFQRSQLAKNQSEE
VGNDLQDLLDRIDKFLGEVGARPAEIRVLAEECIGLSISLKPEQIRELAKEINDTIASLT
DIDAILRETGDDLRLAKDLKAQADRARTMANKILDTAKEVLQNLDDAAEAQGRAKEAIDQ
ARQHINTAEEDPCSGNIEDAAYKAQGVANRSLDQVGGLQDRLAELKKQYTQNNLDARKAD
NEAKGAERMAGQAHAEAEDLEAEYNRAVLDLGNKSSASGDMKDRAEKLRERARKLAEGVN
TKAQQLQGMEDEFDENEQRLKDYSGILEQLNQEMMDHLQRIDQRSTYYRDCQN
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccacaagccatcctggacaatggcatcgtccatacatgtactcttcatagtg
tcattgctggtcatcatatcacatgcacaacgatcaaggccgaatgatcgccagtcccaa
tacactcggcaatatgcagtgcaatcacggggctctcagccgcacgcctgcgaagagtcc
agctgttacccagcgaccggaaacctgctcatcggtcgggaggacaagttgtcggcaacg
tcgacgtgcggtctgcgcggtgtcgagacttactgcatcgtgagccaccttaaagagaag
accaaatgcttccggtgcgactcaacccagaggggcagagattaccacggcatagacaac
atcgtgtcgaggatcggcaaaaagagcaagggatcgtggtggcagtccgagaatggcgtg
cagtcggtgtcgattcggctggacctagaagcagagttccacttcacacatctgatcatc
acattcaagacatttaggccagctgctatgctcatcgaacgttcacatgacaatggacac
acgtggaaggtgtaccagtactttgcgtacgactgccaagaatcattccccactgtgcgg
tacggtccgcggcgcaacatcactgacgtgacctgcgagtcgcactactcgggcgtcgaa
ccctcgaccaacggagaggtcatcttccgtgtgctgccgccgcacatccatatagacaac
ccgcacagccccgatgtgcaagacctgctcaagatgacgaacctgcgcatcaacttcacc
aagctgcacactctcggtgacaaccttttggactcgcgccgggagatcaagcagaagtac
tattacgccgtctatgacatggttgttcgaggctcgtgctcctgctatggccatgccagt
cgctgcataccagaggaaggagagtcctatgctgcacgagatgacatggtgtttggcaag
tgccagtgcacgcacaacacgaaaggcctcaactgcgaaagctgcgaagatctgtacaac
gaccagccctggagaccagcgagtgagagggacccaaatccatgcaaaccctgtaactgc
aatggtcatgccaacaagtgtcacttcgatgcggccgtgtgggagcgttcgggacgcgtg
agtggtggcgtttgtgatgactgccaggacaacaccatgggtctcaactgtgaacagtgc
gtgccgttctacttcaaggatcctcaacgtgacatcagcgatccgtatgcctgccaacct
tgcgattgcgaccctcgtggctccttggatgaaggcgtctgtgacccacaggatgaccca
acctcggggcttgtcgctggccgttgtcactgcaaaaagaatgtcgagtctcgtcgatgc
gaccgctgcaagaagggcttcttcaacttccaagcggctaaccccgacggctgcgagcca
tgcagttgccacgagcttggaacggcgggtgatggctgcaacgtctataccggtgaatgc
acctgcaaacgtaacgtcatcggtcgtgactgcaaccagtgcctgccagaatactacggg
cttagccatgacgatgatggttgcaagccttgtgactgcgaccccggcggcgcgtacgag
aacagctgtgatgtcatcagcggccagtgtcgctgccggcccagcgtccaggggcgccgc
tgtgaccagccagacacgggcttttttgttggaaaccttgatttcatggtccacgaagct
gaactggccaagggcagtcctgactgccaagtgctcatacgagagccgtatgccgaccgg
gatgcatcgtggaccggtctgggctttatgcaagtccaccaggactcttacctcgagttt
gacgttcccgacatacccacatccatggactacaacattgtgttccgttacgagcccaag
cttgctcaaggctgggaagaggctattgtgaccgtggacagaccgggaccggttgacccg
aatgggccctgtgccaatgccattcctcaggatgaccgtcaagtgatcaggttttcgcca
ggtgaccggtacgttgtcgttgccccacctgtctgcctggagaagggtagacactacaaa
gtgcgagtcacattcaagcaatacgaccgcgaggtggacacaccttcggcatcgatctta
atcgattcgatggtgctcatgcccgacataaacgccatcccattcttccacggaacgccg
gcaaacgagtacaggagggaggaattcgaacgtttccggtgcgggcaggcgttctatgcc
gttcgaagagggggcaccctcccagaaatctgcaagaagtacctctacagcatcggcttc
tacgttttccaaggagctcaagattgcaggtgtgacccacagggttctcacagcagcgtg
tgcaacacgctgggcggtcagtgccagtgcaaggccaatgtggtgggccgcagctgcgac
cgctgtgcaccaggaacctacggtttcggacctggaggctgcaggccgtgtgactgcaat
ggaatcggttccctggacaacttttgcgatgcccagaccggccagtgcaaatgccggccc
aacacgtacggccgacagtgcgacgagtgccagccaggctactggaactaccccaactgc
cagcgctgtgactgcaacggtcacgcggacacgtgtgactcgaggaccggtcactgcatc
caatgtcgagacttcacgtcaggaccccactgcgacaggtgcgaagttggcttctatgga
gaccctcgctacggagtagacatcccttgccgcccatgtccatgcccgggcactgcggac
agtggtatcaaccatgctaccagctgcgacctagaccagcgcactggcaacgttatctgt
cactgcgctcaaggatatgtaggcgagaggtgcgaccggtgtgcgaacaactattacggc
gaacccaacgttcctggaggctcgtgtcgccgatgcgagtgcagcggcaacgtcgatgag
acccagccgggcaactgtgactcgcgcacgggcgtctgtctgcggtgtctgtacaacacg
gagggaccccactgcgaacgctgcaagccaggtcactttggaaatgcctcgctccagcag
tgttatgaatgtgtgtgcaaccttcttggcctggaccccaaccaaggatactgtgaccct
gtgactggccagtgcccatgcctgcccaatgtggagggcatcgcctgcgatcgctgcgct
ccaaactactggaagattgccagcggagaaggttgcgaggcttgcggctgtgacccgctc
ggttcttacgacctgaagtgcaacgagtttgacggccagtgtccgtgcaagccgggtcat
ggtggacggcagtgcaatcagtgccaggacaatcactggggcgacccgcgtgtacgctgc
tatcaatgcgagtgcaacgttcctggggcagccacgagccagtgccaccgcaacaacggc
agctgtgtctgcattcctggcgtggctggggagcgctgcgagcagtgtgcccgtggcttc
acgggacgggcaccatactgcgactcctgcggggagtgcttcgacaactgggaccgcatc
attcaggagctccgagaggagacccataacatgatcaactcggcccggcaaatcaagcag
cagggtaccaccggtgtttacacacgcgagttccaagagatggaggagaagctgcacgaa
gtggaggaaatcctgaacggggccaacatcaccggtctcgaccttctagaccgtcagtct
ctcatcgaagagattcggcgcaacttgactgaaagccaaatgcagcttgaggaaatcgga
gaccgctcgggcaacgtgacgcagcgctccttcgccaccaacctgatgcttgcaagtctt
cacgagcaggctcaggaacttggaagaaaggctaaggaattgcgcgagaacaccacagct
ttgcaggaggccaacgtggaaggtgcattaaacatcacgagggaagcccagaaaaggtcc
caaatggctgaaggtcgagtccgaggagcacaagacgacatcgggaagtcacaggctgca
cgtcgttaccttgagcgaaaactgcaggacaccgccagtcaatacaatcgcacttaccag
gagaatgagaatgccctacgcaagctgcaacaagaggtagccgacttggaagaccaaata
tcggatgtcaacgagctcgtgtgctaccgacgaggaaccgtcgatcgttgtgacgcactc
tgcggaggtgcaggctgtaaccactgcggtggactgggttgcgaggaaggcgccctcacc
cgcgccaacaacacactcgcgatggctgtcgatgccaatcagattctcggaaagaaagag
gcggaagctcgggatctcttcaattcggttggttcagctgaaaaggaatcacagcgggcc
ctcgaagaagcaaagaaggctttccaacgctcccagctggcaaagaaccagtcggaagaa
gtcggcaatgacctgcaggacttgcttgaccgcatcgacaagttcctgggcgaggtcgga
gcaaggccggctgaaatccgagtccttgctgaagagtgtatcggtctgtccatctcgctg
aagcctgaacaaattcgagagctggcgaaggaaattaatgacacaatagccagcctgact
gacatcgatgccatcttgagagaaactggggacgatctcaggcttgcaaaagacctcaag
gcacaagcagatcgtgctaggacaatggcaaacaagatcttggacactgccaaggaggtc
ttgcagaatctggatgatgccgcggaagcccaaggcagggccaaggaggctatcgaccag
gcacgacagcacatcaacacggccgaggaagatccttgctcaggtaatattgaagatgct
gcctacaaagcacagggtgtagccaaccggtcgctggatcaggtgggaggactgcaagac
cgactggccgagctcaagaagcagtacacccagaacaacctggatgctcgcaaggcggac
aacgaagcaaagggggccgagcgtatggcaggacaagcacacgctgaagctgaagatttg
gaagccgagtacaacagggctgttttagacctgggcaacaagtcttcagccagcggagac
atgaaagacagggctgagaagctacgggaacgagcccggaagcttgcggaaggtgtcaac
accaaggcccagcaactgcaaggcatggaggatgaatttgacgagaacgagcagagactc
aaggactactccggcatcctggagcagctcaaccaagagatgatggatcatctgcagcgg
atcgatcagcggtccacttattatcgcgactgccagaactaa
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