Rhipicephalus microplus (southern cattle tick): 119163650
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Entry
119163650 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmp03041
]
119163650
03016 Transfer RNA biogenesis [BR:
rmp03016
]
119163650
Enzymes [BR:
rmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119163650
Spliceosome [BR:
rmp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119163650
Transfer RNA biogenesis [BR:
rmp03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
119163650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
Motif
Other DBs
NCBI-GeneID:
119163650
NCBI-ProteinID:
XP_037271589
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All DBs
Position
3:118457080..118495997
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AA seq
740 aa
AA seq
DB search
MTAFEEMGVLPEIARAVDDMEWTLPTDVQAEAVPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLKDDELGKGKKAGAGAKPSSASTKWAMSFFDRGSALAVSPDGLTTQSRDQKGW
HGCRCTKGVQYRGKYYYEAKVTDEGLCRVGWSTQAAALDLGTDKQGFGFGGTGKKSFGKQ
FDSYGEPFGMHDVIGCYLDLDNGSIKFSKNGTVFEEAFQIPQNVKRCPMFPAVVLKNAEM
EFNFGATPFKHPPIDGYVAVSAAPKECVAESTVTGTSVGAPKSVKNAPQAIIIEPSRELA
EQTLKCITSFKKHLKDPVVRELLVIGGVAAKEQIETLRNGVDIVVGTPGRLEDLISTGEL
SLTQVRFFVLDEADGLLNQGNNDLINRIHRQIPQITAEGRRLQMVVCSATLHSFEVKKLA
ERLMHFPTWVDLKGEDSVPETVHHVVCMVDPRKDTSWMNVTRHVVTDQVHERDNVRPGAN
TPETLSEAVKILKGEYTVRAIQQQNMDQGIIFCRTKLDCDNLENYLNHLGKGSRNKDNPF
SCVCLHGDRKPQERKANLETFKRGGVKFLICTDVAARGIDITGVPFVINVTLPDEKSNYV
HRIGRVGRAERMGLAISLVAAVPEKVWYHSNCSSKGRNCFNTNLTDRGGCCIWYNEPQYL
ADIEDHLNVTIQQVEPDLKIPADEFDGKVVYGQKRREMGSNYATHTAQMAPAVQELAQLE
KKSQSIFIQRYYLKDQSFLR
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgtttgaagagatgggcgttctgcccgagatcgcgcgagcagtggacgacatg
gaatggacgctcccaactgacgtgcaagctgaagctgtgccactcattctcggaggcggc
gacgttctcatggccgccgagaccggtagcggcaagaccggtgccttctgtttgccgatc
ttgcaaattgtatgggagacactaaaggacgacgagcttggaaaaggcaagaaagccggc
gcaggagccaaaccaagcagtgcatctacaaaatgggccatgagtttcttcgaccgtgga
tctgcgctcgctgtcagccccgacggtctgaccactcagagcagggaccagaaaggctgg
cacggatgccgttgcaccaagggagtccagtacagaggaaagtactactacgaagcgaag
gtcaccgatgaaggtctctgtcgtgtcgggtggtctacgcaagccgcagctcttgatctt
ggaactgacaagcaagggtttggctttggtggcacgggaaagaagtcgtttggaaagcag
tttgactcatatggggagccctttggaatgcacgatgtgattggctgctaccttgacctg
gataatggcagcatcaagttttccaagaatggtacagtctttgaggaagccttccagata
ccacaaaacgtgaagcggtgccccatgtttcccgctgttgtgctcaagaacgccgagatg
gagttcaacttcggtgcaacacctttcaagcatccacctatcgacggctatgtggcagtt
tcggctgcaccgaaggagtgcgtcgccgagtccacagtcacgggaacttctgttggcgct
cccaagagtgtcaaaaatgctccccaggcaataatcatcgagccctccagagagctggcc
gaacagacgctgaagtgcataacaagttttaagaagcacctcaaggatccagtcgttagg
gagctgctcgtcatcggaggggttgccgcaaaggagcagatcgagacgctgaggaacggg
gttgatattgtggtcggaacacctggtcgtctggaagatctcatcagtacaggggaactc
agcctcacgcaggtgcgattcttcgtgcttgacgaagcggatggcctgctgaaccaaggc
aacaacgacctgatcaaccgcatacaccggcagataccgcagattacggcagagggaagg
cgtctgcagatggtggtgtgttcggcaaccctccattctttcgaggtcaagaaacttgca
gagcgcctgatgcactttccaacctgggtggatctgaaaggcgaggacagtgttccggaa
acggtacaccatgtggtgtgcatggtagacccaagaaaagacacctcttggatgaacgtg
acaagacatgtcgtgacagaccaagtccacgagcgggacaacgtcagacccggtgccaac
acccccgagaccctgtcggaggccgtgaagatcctgaagggcgagtacacggtgcgtgcc
atccagcagcagaacatggaccagggcattatcttctgccgcaccaagctggactgcgac
aacctcgagaactacctcaaccatctcggcaaaggatcccgaaacaaggacaacccgttc
tcatgcgtttgcctccatggtgaccggaaaccccaggagagaaaggccaatctggaaaca
ttcaagaggggcggtgtcaagttccttatctgtacggacgttgccgctcgtggtatcgac
atcacgggcgtcccattcgtgatcaacgttaccctgccagacgagaagtcaaactacgtc
caccgtatcggtagggttggacgagcagaaaggatgggtttggctatttcacttgttgca
gctgttcccgagaaggtgtggtaccactccaactgttcgagcaagggccgcaactgcttc
aacacgaacttgacggaccgcggcggctgctgcatctggtacaatgagccgcagtacctg
gcagacattgaagaccacctgaacgtcaccattcagcaggtggaacccgaccttaagatc
cctgccgacgagtttgacggaaaggttgtgtatggccagaagcgccgggaaatggggagc
aactacgccacgcacactgcgcagatggccccagccgtccaggagctggctcagctggaa
aagaagtcacagtccatatttatccagcgttattacttgaaagaccagtcatttctcaga
tag
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