Rhipicephalus microplus (southern cattle tick): 119163658
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Entry
119163658 CDS
T07403
Name
(RefSeq) WD repeat-containing protein 18-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rmp03009
]
119163658
Ribosome biogenesis [BR:
rmp03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
119163658
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EML
NBCH_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
WDR54
VPS8_N
Motif
Other DBs
NCBI-GeneID:
119163658
NCBI-ProteinID:
XP_037271601
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Position
3:118884700..118905908
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AA seq
440 aa
AA seq
DB search
MASFESIFTSDGAGQLWNTCAWDVVSASVLAQYKGGTSSPRTLCLLGSDYVISAQQDKPL
LRVWSLQRRDQIQKQIVCPGRVSALAASPDGLHCVAGIEDKIYLWQVSSGDLLAVVSRHF
QVITCLRFTDDGGRFVSASRDGQVLVWDLAEVACTGTQGPAEPVHAWSQHSYDVTDIHIG
ALGGTRCYTCSADQTCRVFDIDGGDLLATVVLEAALTAVVTDPAEDHIFAGSSTGKIFEV
ALYKWNTGNKRPEATFLGHEGKVTCLATSLDGQLLVSGSEDCTARVWDVASKQCIHVLHH
KGAVTNVLVVPTPVTLTSMRPSPPTLPLGVFKRTTQAAKDPNGVPVQLESGLMRMSSEEE
ARRNALPRLDLAEALLSTAASFTVGDGDVDGDEDEGSTFEDADLSKQVAMLKEVNKQLYS
YAWNCVLRQQHTTGSEMSSL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgttcgaaagcatctttacgagcgacggcgccgggcaattgtggaacacttgc
gcctgggacgtcgtgtcggcctcggtgctggcacagtacaagggaggcacgagcagtccg
cgcaccttgtgtctcttgggctcggactacgtcatcagcgcgcagcaagacaagccgctg
ctgcgggtatggtcgcttcagcgtcgggatcagattcagaagcaaatcgtgtgccccggc
agggtatcggcgttggcggcgtctcccgacggcctgcactgtgtggccggcatcgaagac
aagatatacctgtggcaggtctcatcaggcgacctccttgccgtggtgagccgccacttc
caggtgattacgtgtctgcgcttcactgacgatggtggccgtttcgtctcggcatcacgt
gatggccaagtgttggtctgggacctggctgaggttgcgtgcaccggcacgcagggaccc
gcagagcccgtgcacgcttggtcgcagcacagctatgacgtcaccgacatccacatcggc
gcgctgggtgggacacgctgctacacttgctcggccgatcagacgtgccgggtgtttgac
attgacggcggtgatctgctggccaccgtagtgctggaggccgcactgacggcagtcgtt
acggatccggctgaggaccacatctttgccggttccagcactggaaagatattcgaggtg
gccctgtacaagtggaacacgggtaacaagcgtccggaagcgacgtttctcggccacgag
ggcaaggtgacctgcttggcgacgtcgctggacggccagctgctggtgtcgggtagcgag
gactgcacagctcgagtgtgggacgtcgcttccaaacagtgcattcacgtcctgcaccac
aagggagccgtcaccaatgttctggtcgtgccaacgcccgtgaccctaacgtccatgagg
ccgtcgccgccgacactcccactgggtgtcttcaagcgcaccacacaggcggccaaggat
ccgaacggagtacccgtgcaactggaatctggcctgatgagaatgagcagcgaggaggag
gcaaggcgaaatgcattgccgcgcctggacttggccgaggcactgctgtctacagccgcg
tcgttcaccgtgggcgacggagatgtcgacggcgacgaagatgagggcagcacatttgag
gacgcagacttgagcaagcaggtggccatgctcaaggaggtgaacaagcagctgtacagt
tacgcttggaactgcgttctcaggcagcagcacacgacgggcagcgagatgtcgtcactg
tga
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