Rhipicephalus microplus (southern cattle tick): 119163676
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Entry
119163676 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2-like
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119163676
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rmp01002
]
119163676
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmp03021
]
119163676
03036 Chromosome and associated proteins [BR:
rmp03036
]
119163676
Peptidases and inhibitors [BR:
rmp01002
]
Metallo peptidases
Family M1
119163676
Transcription machinery [BR:
rmp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119163676
Coactivators
SAGA/TFTC/STAGA complex
119163676
Chromosome and associated proteins [BR:
rmp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
119163676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Peptidase_M1_N
SR-25
Motif
Other DBs
NCBI-GeneID:
119163676
NCBI-ProteinID:
XP_037271627
LinkDB
All DBs
Position
3:121631538..121682032
Genome browser
AA seq
1323 aa
AA seq
DB search
MKKLDKPHEHQRLYKLSHQVLCITSINFQRQSLIGFVELTLFPTKSELRWIRINCKQSRV
YRIRINDQFECAFQYNDPTLDICPGENKLRNIDTFSAAHMAAVKSVDPGYGNGEISVRIP
SEASHLIQEGKAFRVSVEFSLEKPQGGIHFVVPECEGSLAERGVHVFTYGHENSSRLWFP
CIDSYADPCTWKMEFTVDSNMIAVSCGDLVETVYTSDMRKKTFHYSLTTPTSAPKIALAV
GPFEIFVDPQMHEVTHFCLPHLLPLLKQCTNFLHEAFEFYEELLSSRYPYSCYKQVFVAE
AYVDADPYATLTILSVNLLHSKHIIDEAYLSRKIMAKAVAEQFFGCFIAMHTWADSWLPK
GISAYLAGQYNKKAFGNNEYRFSVHKQLKEVTAYEQEAGGIILDPSGCDVPFHFPVTNLH
TMSPKYAEMLRAKSHLVIRMLEDRIGRELLLQVFNKLLSLASSAAQQKVTSNMWHNMLLS
TNSFQKAIFIVTGKDIKTFLEQWVRQGGHAKFPRTFVFNRKRNTVELEIKQTDTQSLGIK
KYVGPLTITIQELDGTFKHNLQIEENATKHDITCHSKSRRNKKKKIPLCTGEEVDMDLSA
MDADSPVLWIRIDPDMLLLRQVVFIQPDYQWQYQLRYERDVTSQIEAIEALSQFPTPQTR
LALTDTIENEHCFYRVRCAAAFCLRQVANNMVATWAGPPAMMTIFRKMFGSHSCPHIIRQ
NNFSNFQHYFLQKAIPVAMAGLRTIHGICPPEVMKFLFDLFKYNENSKNKFSDNYYRTAL
IEALGETVTPVVSVLAHVGQPITVESLSADTKLILEEITRCLNLEKLLPCYKYTITVGCL
KAIRKLQKMGHLPNISALFREYAQYGLFLDVRLAALEALVDYTTVDGNADDLSFLLDIVE
NDPVPRVRLALLLMLTQNPPFSRRDDSPFNTEELAERLWKLMSSGLSHDSRLRCAVVDLY
YVLYGKNRPSCLSGPDANRSSLSMVLNLKEKKAKFQAPAAPEDDFFSMKLEPGSIVSGVE
LLAEAALTATERLDTQVILLGDADHIKTEEEAVVTTQSLEATDAEVTQVEQDEVYVGADE
QQLQHEPPAEPEPVEVIEQPHHEPEEAAHSDVEHMEVEVEEPVAVTPVQPQTSVQPQQKE
TSHSSAESGPVAVPLVPIQPADINYSDDSQSKSLPGLTGASTHHQPTGFDSSMFKMGAPL
PEVSQPQAVPQTDVAAPTPLYPSAAGLPLGVFSLSVTPSTSLGGVSSATGGEADDVVGTV
SSKVHKDKKKKKKKDKKHKHKHKHRSHDRLLEKERFYSSGGSTNQSPAPFGGGASSSPQH
EII
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagctcgacaaacctcatgaacatcagcgactttacaaattgtcccaccaggtg
ctctgcatcacaagcataaacttccagcgtcaatcgctgatcggtttcgtcgagttgacc
ctgttcccgaccaagtccgaactaagatggatcagaatcaactgcaagcagagtcgtgtc
taccggatccgcatcaacgaccagttcgagtgtgcattccagtacaacgaccccacgctg
gacatatgccccggagaaaacaaattgaggaacatcgacaccttctcggctgcccacatg
gcagcagtgaaatctgtcgacccgggctatggaaacggcgaaatctcggtgagaataccc
tcggaagcctcccacctcatccaagagggcaaagcctttcgagtcagcgtcgaattctcc
ttggagaagccacagggtggcatacatttcgtggtacctgaatgtgagggatctcttgcg
gagcgtggcgttcacgtcttcacctacggccacgagaactcttcaaggctttggttccca
tgcatagactcatacgcggacccctgcacatggaagatggagtttacggtggactccaac
atgatcgccgtgtcgtgcggggacctcgtggagactgtctacacgtcggacatgaggaag
aagacgttccactacagcctcaccacgccgacttcggcacccaagatcgcactggctgta
gggcccttcgagatctttgtagaccctcagatgcacgaggtgacgcatttctgcctcccg
cacctactgcccctcctgaagcagtgcaccaacttccttcatgaggcctttgagttctat
gaggaactcctgtcgagtcggtatccgtactcctgctacaagcaggtgtttgtcgccgaa
gcctacgtcgatgctgacccgtacgcaacactcaccatcctgagcgtcaaccttctgcat
tcaaagcacatcattgatgaagcatacctttcgcgcaagatcatggccaaggcagtggct
gagcaattctttggctgcttcattgcgatgcacacatgggccgactcatggctgcccaag
gggatttcagcgtaccttgccggccagtacaacaagaaggcatttgggaacaatgagtac
agattctcagttcacaagcaactgaaagaagtgacagcctacgaacaggaagcgggcggc
atcatactggacccgagtggttgcgacgtgccctttcactttccagtcaccaacttgcac
acaatgtcaccaaagtacgctgagatgttgcgtgccaagtcccacctcgtcattcgcatg
ctcgaagaccgcatcggaagggagctgcttttgcaggtattcaacaaacttctctcgctc
gcaagttctgcagctcagcagaaagtcacttccaacatgtggcacaacatgctcctatca
actaacagcttccagaaggcaatattcatagtgactggaaaggatatcaagaccttcttg
gagcagtgggtacgccaaggtggtcacgccaagtttccacggacgttcgtcttcaaccgg
aagcgcaacaccgtggagctcgaaataaagcagaccgacacgcagtcactgggcatcaag
aaatatgtgggtccactaaccattaccatccaagagttggatggcacgttcaagcacaac
cttcagattgaagagaacgccaccaagcacgacatcacctgccactcgaagagcaggagg
aacaagaagaagaagattcctctatgcacgggtgaagaggtggacatggatctctctgca
atggatgctgactcacccgtgctgtggattcgcattgacccggacatgctgcttctgcgg
caggtggtattcatccagcccgactaccagtggcagtaccagctgcgctacgagcgggac
gttacatctcaaatcgaggcaattgaagcgttgagccagtttcccaccccgcaaacccga
ctcgcactgacggacaccatcgagaacgagcactgtttctacagagtccgatgcgccgct
gccttctgcctgcgccaggtggctaacaacatggtggcgacgtgggcggggccaccagcg
atgatgaccatcttcaggaagatgtttggctcgcactcgtgcccacacatcattaggcag
aacaacttctcaaacttccaacactactttctgcagaaggcaatacctgtggccatggct
ggcctacgaaccatccacggcatttgtccaccagaagtcatgaagttcctgttcgacctc
ttcaagtacaatgaaaacagcaagaacaagttttccgacaactactatcggacagctctc
atcgaagccctcggcgagactgtcacgccggtcgtgtctgtcctggcccacgtgggccag
cccatcaccgtcgagtcgctgtcggcagacaccaagctcatcctggaggaaatcacccgc
tgcctcaacctcgagaagctcttgccttgctacaagtatacgataactgtagggtgtttg
aaggccattcgcaagctgcagaagatgggtcaccttccgaacatatccgcgctgttccgc
gagtacgcccagtacggactctttctcgacgtccgcctggcggctctggaggctcttgtt
gactacacgacagttgatggaaacgccgacgatctgagcttcctgttggacattgtggag
aatgaccccgttcctcgcgtcagattggccctgttgctgatgctaacgcagaacccaccg
ttttcgcggcgcgacgacagccccttcaacaccgaagagcttgccgagaggctgtggaag
ctgatgagttccggactctctcatgactcgcgtctgcgatgtgccgtggtggacttgtac
tatgtattgtatggaaagaaccggccgtcatgcctctcgggtccagacgccaaccgctcc
tcactgtctatggtgctcaacctgaaagaaaagaaagccaagttccaggcacctgcagct
cctgaggacgacttcttttcgatgaaacttgagccaggtagcatagtgtccggcgtggaa
ctcctagccgaggcggctctcaccgcaactgagcggcttgacacacaggtgattctgcta
ggggacgctgatcacatcaagacggaggaagaggctgtcgtgactactcagtcattggaa
gccacagacgctgaggtcactcaggtggagcaagacgaagtgtacgtaggtgccgacgaa
cagcagctgcaacacgagccgccagccgagccggagccggttgaagtcattgagcagccg
caccatgagcccgaggaagctgctcactcggatgtggaacacatggaggtcgaagttgag
gagccggtagccgtcacacccgtgcaaccacaaacatcggtgcaaccgcagcagaaagag
acatcgcacagcagtgcggagtctggtccggtggctgtgccactggttccgattcagccg
gccgacatcaactactccgacgactcacagtccaagtcactgccagggcttacaggtgct
tcgacccaccaccagccaactggcttcgactcgagcatgttcaagatgggcgctccgctt
cctgaagtatcccagccgcaagccgtccctcagacggacgtcgctgcgccgacgcctctg
tatccatccgccgccgggcttcccctgggcgtgttttccctgtccgtcacgccatcgaca
tcgctcggcggggtgtcgtctgccacgggtggtgaagcagatgacgtcgtcggcactgtg
agctccaaagtgcacaaagacaaaaagaagaagaagaaaaaagacaagaagcacaagcat
aaacacaagcatcgcagccacgaccgactcttggaaaaggagcgcttctacagttcgggc
ggcagcaccaaccagtcgccagcgccgtttggaggtggcgcgtcgagcagccctcaacac
gagattatctga
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integrated database retrieval system
