Rhipicephalus microplus (southern cattle tick): 119164100
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Entry
119164100 CDS
T07403
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119164100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119164100
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119164100
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119164100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
119164100
NCBI-ProteinID:
XP_037272103
LinkDB
All DBs
Position
3:167564114..167597132
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AA seq
493 aa
AA seq
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MTSSPSQPFGYGQPTGSSLIPFFPSVSQQQQPGVLPGGGGSRGAPFPDMFGADKATSSSS
FGDLGLRGTLGGTLSQFPPSVARPPPTSLSGFPPASLPPPQQASPNSRNMLTIGSRALPG
QRQVGPDINRLVGLGAPPRTGYTDQSSLWRNNVPASGGGISSFGMSHSSRNFPSSQSLMG
NSLQSQLFNSNPALDLSEFPSLTNRGSQEGSAQSLNSNPMAGRAAYGKLFGMVKQPNNDS
NEFHIHNEDFPALPGSQGQENSQDSLSKQTSNATSESSKDGSGFSSDKVTSQPVKRGIQT
SKDGTVTNIPAGMVTDQYGMVGLLTFIRAAETDPNLVSLALGSDLTTLGLNLNSPENLYP
VFGGPWAEQPCRPQDIDYHVPSEYIINQSIRDKLAGIKLNRYGEDLLFFIFYMFGGDLLQ
LLSAAELYNRDWRFHKDERVWITRAGISPTEKTSTYERGTYFFFDPVNWRKVAKEFHLDY
DRLEDRPQQYPPL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgtcgccatcacaaccatttggatatggccaacctactggaagctcgctcatc
ccttttttcccgtcggtctcccagcagcagcagccgggagtgctgcctggcggtgggggt
tcccggggggcaccctttcccgacatgttcggtgccgacaaggcgaccagctcgtcatca
tttggggacctgggcctgcgaggcactctcgggggcacactctctcagttccctccgtcg
gtggcgaggcctccgccaacaagtctgtctggtttcccaccagcatctctgccgccgcca
cagcaggcatcaccaaacagccgaaatatgctgacaatcgggtcgagagcgttgcccgga
cagcggcaagttggccccgacatcaatcggttagttggattgggagcaccccccaggaca
gggtacacggaccagagttcactatggaggaacaatgtcccagcatcggggggtggcata
tcaagctttggcatgtcgcacagttctcgtaacttcccttcatcacagtcactcatgggg
aacagtcttcagagccagctgttcaactctaacccagcgttggacctctccgagtttccg
tcactgacgaaccggggttcccaagaagggtcagcgcagtccttgaacagcaatcccatg
gcagggagggcggcatacggcaaactcttcggtatggtgaagcagcccaacaacgactcc
aacgagttccacattcacaatgaggacttccccgcgttaccgggctctcaaggtcaggaa
aacagtcaagacagcttaagtaaacagacgagtaatgccaccagcgagtcctcgaaagat
ggcagtggtttctctagcgacaaggtgacgtcacagccggtcaagagaggcatccagaca
tcaaaagatgggacggtaacgaacatccctgcgggcatggtcacggaccagtacggcatg
gtggggctcttgacattcatcagagcggctgagacggatcccaacctcgtctcactggcc
ttggggagcgacctcacgacgttagggctcaacctcaactctcccgaaaacctttatcct
gtgttcggaggtccctgggcagaacagccttgcaggccgcaggacatcgactaccacgtt
ccttcagagtacatcatcaaccagagcatccgggacaaactagcgggcatcaagctgaat
cgatatggcgaagacttgcttttcttcatattctacatgtttgggggcgacctgttacag
ctgctttctgctgccgagctgtacaaccgggactggcgtttccacaaggacgagcgggtc
tggatcacgcgagcgggcatctcaccaacggaaaagacgtcgacgtacgagcgtgggaca
tactttttcttcgacccagtcaactggcggaaggtcgccaaggagttccacctcgactac
gaccggctcgaagaccggccacagcagtatccgcccctctga
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