Rhipicephalus microplus (southern cattle tick): 119164835
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Entry
119164835 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup153-like
KO
K14296
nuclear pore complex protein Nup153
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03013
Nucleocytoplasmic transport
rmp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119164835
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119164835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119164835
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119164835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
119164835
NCBI-ProteinID:
XP_037272934
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All DBs
Position
3:complement(97794112..97865039)
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AA seq
1409 aa
AA seq
DB search
MAGRPTRRNDEREHRLRPYERPRSVLQTMTSVVRHLLTPSWLSEPSSEPVIDQRPELING
ERDSSVCMSLGSPPRSTRDCAVGPDGEPNEVAPSPSVPATLLPETPLQRPSERRQERPQE
QPLERTLGRLFEQPSERYEQSPVRLSERLSERLSERPLGQTLKRTLERSPEQPSEWALQQ
SQLRRGASPSNSSRTSLVGSPSFVKRQKIWFEDSPIKSPFYSGQTTYGGAAAQNRLRMLA
TSQTPTVPVVARGVKPGGATVGLSNTTRQILASLEKMATPVTEAKRVPLRSRIADGRTWT
LLHHRDPPAPTQGGPPVRSAARPSVRTIVPPRTEASRLEVARKESAAAESSWADSLKTKV
LRADTGKPEVPSVDAPKQYPLRLTEAPSVETSSVTVAPTVKPNSVASAWEPPCSRSASDR
AAGGGKMVRVIHSAHPAPLKMSGPPLESEEELPPPVPLPPIQKLPKFSFNLNPPQTQPVT
TPTTITSNSSGKTSGGSISSGLVSSSPINSSTMNSSAFSPSAVGPSAISPSAVSTSAFSS
SAVSSGPTSSGTIISGSVSSGIVNTGFLGTNLVSSSHVSSSHVSSSPISSSLVSSSLVRS
GPISSIPTSTNPAGAHCRAEFTFSKPKPLASASAALVAQSQRDQVYQFSEPWGPRGDERQ
KEGTLSDKTDHSHKKPGEAILTKSEPNVSVPESKKSGDTRKPGNATAKNDKDSSSSTKGG
GDLWARFKPAAGSWSCSECMITNPASASRCQACETLRPGSTPKPAAPAPTSVASTVPAPV
APPPASVAAGNLPPWECGTCLVRNETSATRCCACETPRSSANSATAGAAPSAAASGSLWE
CDTCLVRNQPSAARCCACENPRPLASTACSFLAAAAAFNFKLPSSESSGFGGAPFAAAPA
QFKFGIPSSGTAKPSEAVPSVESAGKPFKFGITSTTTVTSAPSSTTAVAPMKDFKFGSSS
EEPSKAINFGSSASEASKAFKFGSNTEEQATPFKFGTTTNEPATKSFKFGTTASERQTKS
FTFGASSEEPTKKAKPNTTTEEAAKLFNFGSSSEQPSKPLKFGCTTDEQAKLPQTGSGSE
ASTKSFKFSASTDEPAKPSPVANSAEGASGGFKLGHMAEPSKEFTFGSTTVKEPAKPFAF
GTTPSTETSTGGFKFGATAEDSTKSVRPGSSEEQQPPAKTFKFLNPSGPTEPSKLFQFGA
TVEPTPKLGATVDTPTKPFSFGTPATTAGAAETAPKQFLFGLAAKPSEMSAPPAAVQQPS
VVHPGGSQTTTAGQLAGFLAPATTAHAAISLPAAAPTMEPAKPAFPSSQFVFGQKSDASA
ATFSFGSQPVSPAFPQPASGASTPLPSFGTLANKPPEPHVAAQQPAFGIGAYTHTCFWCP
QPSQACCRTCSSTHGHQHDKWLWYATANA
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaagacccacccgccgtaatgatgagagggaacataggctgagaccttacgaa
agacccaggtctgtgctgcaaactatgacatcggtagtgcgtcacctgctgacaccctcc
tggttgagtgaaccctcatctgagcctgtcatcgatcaaagaccagagcttataaatggt
gagagagactcgtctgtttgtatgtccctgggatccccaccacggtcgacgcgagactgt
gctgtggggccggacggcgagcctaatgaagtggcgcctagcccctctgtgcctgcgacg
ttgcttccggagacgccattgcagcgaccctcagaacgacgtcaggagcggccacaggag
cagcctttggaaagaacgttaggaaggttatttgagcagccatcggaaagatatgaacaa
tcaccggtacgtttatcggaacggctatccgaacggttgtctgaacggccactgggacag
accttgaagcgtactttggaacggtctccagagcagcccagcgagtgggcattgcaacag
tcacagctgcggcgaggcgcttcacccagcaacagcagtcgaacaagtctcgttgggtca
cctagcttcgtcaagagacaaaaaatctggtttgaagatagccccataaaatcgccattc
tactctggtcagacaacgtatggcggagctgcggcccagaataggctgcgaatgttggcg
acgtcacagactcccacggtcccagtcgtggcccgaggtgtgaagccaggaggagcaact
gttgggctcagcaacactactcgccagatcttggcctccctggagaagatggcgactcct
gttacggaggccaagcgtgtgccacttaggagtagaatagcagacggccgaacttggact
cttctacaccacagagatcccccggcaccaacgcagggtgggcctccggtcaggagtgca
gctaggccatctgttcgaactatagtgccgcctcggacagaagcttcccgactggaggtc
gctcgaaaggaaagcgctgctgccgaatcctcatgggctgattctctcaaaacaaaggtg
cttcgggcggacactggcaaacctgaagtgccttcagttgatgctcccaagcaataccct
ctaaggctaacggaggcccccagtgttgaaacaagcagcgtgactgtggctcctaccgtc
aaaccaaactcagtggcttctgcttgggaacctccatgtagtagatcagcatctgatcgg
gcggcaggaggaggaaagatggttcgtgttatccactctgcccacccagcaccactgaag
atgagtggcccaccattggaatcagaggaagaactcccccctccggtaccccttccaccc
atccagaagcttcctaaattctccttcaacctcaatccaccacaaacacagccagtaaca
acaccgaccactatcacaagcaacagcagtggcaagacaagtggtggaagtatcagttct
ggccttgtaagctctagcccaatcaactctagcaccatgaactctagtgccttcagccct
agtgccgtcggccctagtgccatcagccctagtgccgtcagcactagtgccttcagttct
agtgccgtcagctctggccccaccagctctggcaccatcatctctggatctgtcagttct
ggcattgtaaacactggcttcttaggtaccaaccttgtaagctccagccatgtcagctcc
agccatgtcagctccagccctatcagttcaagccttgtgagctccagccttgtcagatct
ggcccaatcagcagtatccccaccagcaccaaccctgctggtgcacactgtcgtgctgag
ttcacattcagcaagccaaagccattggctagcgctagtgctgcattggtggcacaatcc
cagagggaccaggtatatcaattctctgagccttgggggccgcgtggtgacgaaagacag
aaggagggaacactgagtgacaaaacagaccacagtcacaagaaacccggagaagccatt
ttgaccaagtctgagccgaatgttagtgtaccagagagcaagaagtctggagacacaaga
aagcccggaaatgccacggccaaaaatgacaaggacagcagcagttccacaaaaggtggc
ggagacctgtgggcacgtttcaagccagctgccggaagctggtcgtgttcggagtgcatg
atcaccaatccggcctctgcaagccgctgccaagcctgcgagacgctgcgtcccgggtcc
actcccaaaccagcagcaccagctcctactagtgtcgcttcaaccgtgcctgcccctgtg
gccccaccgcctgcgagtgtagctgctggcaacctccccccgtgggagtgcggcacgtgc
ctggtgaggaacgagaccagcgcaactcgctgctgtgcgtgcgagactcctcggtcgtca
gccaacagtgctacggccggtgctgcaccttccgcggcggccagtgggtccctctgggag
tgcgacacgtgcctggtcaggaaccaaccatcggcagcacgttgttgcgcgtgcgagaat
cctcggccgttggccagcactgcctgctctttcctcgcggctgctgcagcattcaatttc
aagttgccttcctccgagtccagcggtttcggtggtgcgccatttgctgcggcacctgcg
caattcaagtttggcataccttcatcgggcactgcgaagccatccgaggctgttccttct
gtggagagtgcagggaaacctttcaagtttggcattactagcactaccactgttacaagt
gccccttcttctacaactgctgtggcaccgatgaaggacttcaagtttggttcgtcctcg
gaggaaccatcaaaggccatcaattttggttcgtcagctagtgaagcatcaaaggcattc
aagtttggctcgaacactgaagagcaagctacacctttcaaatttggcaccaccactaac
gagcctgcaacaaagtcatttaagtttggcacaacggcatctgaacggcagacaaagtca
tttacatttggtgctagttcagaggagccaacgaagaaagccaaaccaaacacaactaca
gaagaagcagctaagctgttcaacttcggttcgtcctcagagcagccctcgaagcctctg
aagtttggctgcaccacagacgagcaagccaagttgcctcagactggaagtggctcagaa
gcttctacaaagtctttcaagttcagtgccagcacagatgagcctgccaagccatcccca
gtcgccaactctgcagaaggtgcatcgggtggcttcaaactcggccacatggcagagcca
agcaaagaatttacttttgggtccactactgtcaaggaaccggcaaaaccgtttgcattt
ggcaccaccccttcgacagagacatccactggaggcttcaagtttggcgccactgcagag
gattctacgaagagtgtcaggcctggttcctccgaagaacagcaaccacctgcaaagact
ttcaagttcctcaacccatcgggtcccaccgaaccgtctaagctgtttcaatttggtgcc
actgtagagccaacaccaaaattaggtgcaactgtcgacactcccactaagcctttcagt
ttcgggacgcctgcaactacagcaggagcagcagagacagcaccaaagcagtttttattt
ggcttggcagcaaagcccagtgaaatgtcagcccccccagcggcagtgcagcagccgtct
gttgtgcatccgggaggcagccagactaccactgctggacaactggctggcttcctagca
ccagctactaccgcgcatgcggccatttccctgccggcagcagcaccaaccatggaacct
gctaagccggcctttccaagttcccagtttgtctttggccagaagagtgatgccagcgct
gcgacattttcatttggctcccagcctgtgtcgccagcttttccccaacctgccagcggt
gcatcgacccctctgccatcttttggcactctggcaaacaagcccccagagccacatgtg
gcagcacagcagccggcatttggcattggggcttacacccacacctgcttttggtgccct
caaccctctcaagcctgctgccgcacctgcagtagcacccacggccaccagcatgacaag
tggctttggtatgcaacagcaaacgcctag
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