Rhipicephalus microplus (southern cattle tick): 119165443
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Entry
119165443 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC119165443
KO
K22538
mitochondrial RNA pseudouridine synthase RPUSD4 [EC:5.4.99.-]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rmp03016
]
119165443
03029 Mitochondrial biogenesis [BR:
rmp03029
]
119165443
Transfer RNA biogenesis [BR:
rmp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
119165443
Mitochondrial biogenesis [BR:
rmp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
119165443
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
119165443
NCBI-ProteinID:
XP_037273518
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Position
3:complement(212502677..212505342)
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AA seq
698 aa
AA seq
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MCKAKSIRNLDARQTQDGCALRACECVQLRSPSSDPRRFTASSRGLSTSRALSVRGTKLS
VERDDERCAVDDDFYGISGDHGVVSVDNPLGDPHERIRRFSHLTRRRDAKVSDETVVAAD
FGTIRYDRDNRARYHGQYEDDTLLDELVLDTYSGESSKPGREAPDKGANKSELRDARETI
ISARKWSQKKEAVALAVAVVQETTVCIGNRKMQFRSEETGSSTDSLARSSEQSSTLGSDH
LESAVRVFSPAKATADRSKRTAVHAKEIGGKELSKSEASSSLKSSSKSFVTTARTAEEED
CESSVSRTRTRAPKKPRSNDMLESDNVGKAARSFLEEPTTATAEFELSQSSSSTIQDSSN
ASQRRSKTRARKASGEVIVDNSSNVPDTGNPTAFEYVHKPQQFSLKLDSKGFFILKSEVK
PNLAFMLRSEVVDVLRQRVLHDGNDVLILDKPYGMICHGSAKGVPDSHVLVRLLPDLSAA
LYPREDIKLYTVHRLDRDVTGAIVLAKTQRMADMLQTLFEEHNISKTYHAITFGVPDNDC
ATIDMPLAEGSVGLAKRMVICPKLEPEFERLVPKFSKTYEAITHYRVLSSHGRAAYLEVK
PVTGVKHQIRVHLGFGLRCPILGDHKYSHLRELAPQRLSGDLLARLNVRQTKVRHIPMHL
HASSVMIPEILDGRNLLVRAPLPYHFLQNLKRLKLHRH
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaaagccaaatcgatccgcaatttagacgctaggcagacacaagatggctgcgcg
cttcgtgcgtgcgagtgtgtgcagttgcgttcgccttcaagcgaccctcgcaggttcacg
gcgagttcccgtggcctgtcgacgtcccgggcgctctcggtgcgaggcacgaagctgagc
gtcgagcgcgacgacgaacgttgcgccgtcgacgacgacttctacggcatctcgggcgac
cacggcgtagtcagcgtcgacaacccgctaggggaccctcacgagagaattcgccgtttc
tcacacctcacgcgacgccgcgatgcgaaggtttcggacgaaaccgtcgtggctgccgac
ttcggcacgatccgctacgaccgcgacaaccgggcccggtaccacgggcagtacgaagac
gacacgctattggacgagctcgtattggatacctacagcggggagtcatctaagcccggt
cgtgaggccccggataagggtgcgaacaaatcggagctgcgagacgcgcgtgaaacaatc
atttcggcgagaaaatggagccagaaaaaagaagcggtcgcattggcagttgcagtcgtc
caagaaacgaccgtctgcatcggcaatagaaaaatgcagttcaggtccgaggaaacaggc
tccagtacggactcactggcacgtagcagtgaacagagcagtacgcttggtagcgaccac
ctggaaagcgctgtgagggtgttttcgccagccaaagcgactgcagacagaagcaaaaga
actgcagtgcatgccaaggagataggcggcaaggaattgagcaaaagtgaagcctcgtct
tcgcttaaaagctcttcgaaaagttttgtgacaactgcaagaacagctgaggaggaggac
tgcgaaagttcagtgtccagaaccagaacgagagcaccaaaaaagccgaggtcaaatgat
atgctcgaaagtgataacgtaggaaaggcggcgcgctccttcctagaagagccaacaaca
gcgaccgctgagtttgagctgagccagtcatcatcttccaccatccaagatagttccaat
gcttcccagcgcagatccaaaaccagagccaggaaagcgagcggcgaagtgattgtcgac
aactcttcaaatgtcccagacacaggcaatcctacagctttcgagtatgtccacaagccg
cagcagttcagcctcaagctcgacagcaagggcttcttcattctgaaatcagaggttaag
cctaacctagcctttatgctacgctctgaggtggtagatgtgttgaggcagcgtgtcctg
cacgatggcaacgacgtacttattctagacaagccatacggcatgatctgccatggatcc
gcgaagggtgtccccgactctcatgtgttagtacgtctgttaccggacctctctgctgcc
ctgtatccaagggaagacataaagctgtacactgtgcaccgtctggaccgcgacgtgacg
ggcgccatcgtgctggcaaagacgcagcgaatggcagacatgctgcagacactgtttgag
gagcacaacatctctaagacttaccacgcgataacattcggggtgcccgacaatgactgt
gcaacgatcgacatgcctctcgcggaaggatctgttggcttggccaagcgtatggtcatc
tgcccgaaactggagcctgagttcgagcggctcgtgccgaagttctccaagacatacgaa
gcgatcacgcattaccgcgtgctaagctcccatggcagggcagcctacctggaagtgaag
ccggtgactggggtcaaacaccagatcagagtgcacctggggtttgggctgcgctgtccc
attctgggcgaccacaagtactcgcacctgagggagctggctccgcagaggctctccgga
gacctgttggccaggctgaacgtgaggcagaccaaagtgaggcacatccccatgcacctc
cacgccagctcggtcatgatccccgagatcttggatggcaggaacttactggtcagggca
ccacttccgtaccacttcttgcagaacttgaaacgactcaagcttcacaggcactga
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