KEGG   Rhipicephalus microplus (southern cattle tick): 119166735
Entry
119166735         CDS       T07403                                 
Symbol
tex
Name
(RefSeq) THO complex 3 homolog tex
  KO
K12880  THO complex subunit 3
Organism
rmp  Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03013  Nucleocytoplasmic transport
rmp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rmp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119166735 (tex)
  09122 Translation
   03013 Nucleocytoplasmic transport
    119166735 (tex)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rmp03019]
    119166735 (tex)
   03041 Spliceosome [BR:rmp03041]
    119166735 (tex)
Messenger RNA biogenesis [BR:rmp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     119166735 (tex)
Spliceosome [BR:rmp03041]
 Complex C
  Other components
   EJC/TREX
    119166735 (tex)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    119166735 (tex)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st WD40 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 ANAPC4_WD40 WD40_Gbeta Beta-prop_WDR19_1st EIF3I Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd eIF2A Beta-prop_TEP1_2nd Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_NOL10_N Beta-prop_Vps41 Beta-prop_EML Beta-prop_IFT140_1st DSE1_N Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_HPS5 RMC1_N WDR90_beta-prop_4th Beta-prop_WDR75_1st WD40_RFWD3 Tricorn_2nd WD40_MABP1-WDR62_1st PAC11 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Beta-prop_ACSF4 Beta-prop_SPT8 PD40 WD_LRWD1 PROPPIN
Other DBs
NCBI-GeneID: 119166735
NCBI-ProteinID: XP_037273959
LinkDB
Position
6:complement(191792140..191798028)
AA seq 345 aa
MARSLDVDSVRRQLRFDMAPNRSWNQQQSAHSQALTAFFQANSRVKDYQAHSSKVHSVNW
SCDGRRLACGSFDKTVSIFVLDKDRMAKDHVFKGHGDSVDQLCWHPSNPDHLATASLDKT
VRLWDARTQKSIAVVGTKGENINICWAPDGQTIAVGNKEDLVSFIDVRSHKVRTDQQFKF
EVNEISWNNTNTHFFLTSGQGCIHILSYPDLQLQTVLNAHPANCICIEFDPTGKYFATGS
VDALVSLWDVQELACLRTFSRLEWPVRTISFSYDGKMLASASEDLLIDIADVETGEKIFE
VPCESPTFTIAWHPKRHLLAFACDDKGERDQDAGTVKLFGLPSSS
NT seq 1038 nt   +upstreamnt  +downstreamnt
atggcgcgctctcttgatgtcgatagcgttcgtcgtcaactccgtttcgacatggcgccg
aataggagctggaaccagcagcaatcggcccattcccaggcgctcaccgctttcttccag
gccaacagccgcgtcaaagattaccaggcacactcgtcgaaagttcactccgtcaactgg
agttgcgatggccgtcgcctggcctgcggcagctttgacaagaccgtcagcatcttcgtc
ttggacaaggatcgcatggcgaaggaccacgtcttcaaaggtcacggagacagcgtcgac
caactgtgctggcacccttcgaacccggaccacttggcaacggcaagcttggacaaaact
gtccggttgtgggatgcacggacacaaaagtcgatagccgtggttggcactaaaggcgag
aacatcaacatctgctgggcacccgatgggcagacaattgctgtcggaaacaaggaagac
ttggtgtccttcattgacgtccgatcgcacaaggtccgcacggaccagcagttcaagttt
gaggtcaacgagatctcttggaacaacaccaacacacacttcttcctcaccagtggccag
ggttgcatccacattctcagctaccctgacctacagctgcaaacggtactcaatgctcat
ccggccaactgcatctgcattgagtttgatccgacaggcaagtactttgccacaggcagc
gtggatgccctggtcagtctgtgggacgtccaagagttggcctgcctccggacgttctct
cggttggagtggccagtgcggaccatcagcttcagctacgacggcaaaatgttggcatct
gcatcggaagatctgcttattgacattgccgacgtggaaactggggaaaagatctttgaa
gtaccctgcgagtcgcccaccttcaccatagcatggcatcccaagcgccacctgctggca
ttcgcctgcgacgataaaggggagcgcgatcaagacgcaggaacggtgaagctctttggc
ctgcccagttcgtcctga

DBGET integrated database retrieval system